RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 HLA-DRB1P01911 266 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 CEACAM3P40198 252 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 Q56UQ5 140 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 EBLN2Q6P2I7 272 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 ATOH7Q8N100 152 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 GRAMD2BQ96HH9 432 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 SERTAD4Q9NUC0 356 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 TMEM14BQ9NUH8 114 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 GGTLC3B5MD39 225 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 MGST1P10620 155 aaKnown RBP10.19□□□□□ -0.78
LINC00642-201ENST00000419459 SLC35B1P78383 322 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 SMIM12Q96EX1 92 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 TNFRSF19Q9NS68 423 aa10.19□□□□□ -0.78
LINC00642-201ENST00000419459 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 MINOS1Q5TGZ0 78 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 DEFB125Q8N687 156 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 OR5AN1Q8NGI8 311 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
LINC00642-201ENST00000419459 CST9LQ9H4G1 147 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 MINOS1-NBL1R4GNA1 71 aa10.18□□□□□ -0.78
LINC00642-201ENST00000419459 OR7C2O60412 319 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 FSHBP01225 129 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 C8orf88P0DMB2 117 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 CNTFRP26992 372 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 MFAP2P55001 183 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 POU2AF1Q16633 256 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 OCIAD2Q56VL3 154 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 FAM71F2Q6NXP2 309 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 CFHR4Q92496 578 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 ZNF503Q96F45 646 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 ZNF257Q9Y2Q1 563 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 SRRM4A7MD48 611 aaKnown RBP10.17□□□□□ -0.78
LINC00642-201ENST00000419459 HES1Q14469 280 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 DEFB112Q30KQ8 113 aa10.17□□□□□ -0.78
LINC00642-201ENST00000419459 TET2Q6N021 2002 aaPredicted RBP10.17□□□□□ -0.78
LINC00642-201ENST00000419459 OR4C46A6NHA9 309 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 K7ERU9 68 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 ACTL6BO94805 426 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 APOA2P02652 100 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 OR5AL1P0C617 328 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
LINC00642-201ENST00000419459 RNF151Q2KHN1 245 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 RNASEKQ6P5S7 137 aaKnown RBP10.16□□□□□ -0.78
LINC00642-201ENST00000419459 SLC25A34Q6PIV7 304 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 Q6ZVH6 145 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 NUP35Q8NFH5 326 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 ADTRPQ96IZ2 230 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 HARBI1Q96MB7 349 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 VPS25Q9BRG1 176 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 PRNDQ9UKY0 176 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 WASHC3Q9Y3C0 194 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 TRAV3A0A0B4J244 114 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 BVES-AS1Q5T3Y7 98 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 CCDC144NLQ6NUI1 221 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
LINC00642-201ENST00000419459 SLC25A33Q9BSK2 321 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 MS4A6AQ9H2W1 248 aa10.16□□□□□ -0.78
LINC00642-201ENST00000419459 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
LINC00642-201ENST00000419459 A0A1B0GXF2 115 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 MPV17L2Q567V2 206 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 OR4A47Q6IF82 309 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 NHLRC2Q8NBF2 726 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 FLYWCH2Q96CP2 140 aaKnown RBP10.15□□□□□ -0.78
LINC00642-201ENST00000419459 DUX5Q96PT3 197 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
LINC00642-201ENST00000419459 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 OR4C13Q8NGP0 309 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 H3BUX3 64 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 RPL8P62917 257 aaKnown RBP10.14□□□□□ -0.79
LINC00642-201ENST00000419459 PRCDQ00LT1 54 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 LY6EQ16553 131 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 C2orf83Q53S99 150 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 CT83Q5H943 113 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 PDPNQ86YL7 162 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 JMJD1CQ15652 2540 aa10.14□□□□□ -0.79
LINC00642-201ENST00000419459 SLC25A17O43808 307 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 NUDT3O95989 172 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 IGHV4-59P01825 116 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 SAA1P0DJI8 122 aaPredicted RBP10.13□□□□□ -0.79
LINC00642-201ENST00000419459 MC5RP33032 325 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
LINC00642-201ENST00000419459 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 PRR27Q6MZM9 219 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 PIFOQ8TCI5 191 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 CACNG8Q8WXS5 425 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 CSTL1Q9H114 145 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 ZNF355PQ9NSJ1 428 aa10.13□□□□□ -0.79
LINC00642-201ENST00000419459 PEF1Q9UBV8 284 aaKnown RBP10.13□□□□□ -0.79
LINC00642-201ENST00000419459 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms