RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SSC4DQ8WTU2 575 aa6.95□□□□□ -1.3
PBRM1-209ENST00000412587 DOCK9Q9BZ29 2069 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 TRAV24A0A0B4J272 114 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MBD3L4A6NDZ8 208 aaPredicted RBP6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MBD3L5A6NJ08 208 aaPredicted RBP6.94□□□□□ -1.3
PBRM1-209ENST00000412587 IGHV1-46P01743 117 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 IGHV3-48P01763 117 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 THBDP07204 575 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 NUP37Q8NFH4 326 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
PBRM1-209ENST00000412587 KLK15Q9H2R5 256 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MED13LQ71F56 2210 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 MPDZO75970 2070 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 NLRC5Q86WI3 1866 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 TMEM78Q5T7P6 136 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
PBRM1-209ENST00000412587 TSC2P49815 1807 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 SLC25A20O43772 301 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 LINC01545Q5VT33 79 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 SLC25A15Q9Y619 301 aa6.94□□□□□ -1.3
PBRM1-209ENST00000412587 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
PBRM1-209ENST00000412587 IGHV3-35A0A0C4DH35 117 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 LINC01549A6NIU2 74 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 GNLYP22749 145 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 C11orf52Q96A22 123 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 CYYR1Q96J86 154 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 MRPL20Q9BYC9 149 aaKnown RBP6.93□□□□□ -1.3
PBRM1-209ENST00000412587 WNT2P09544 360 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 OR11H6Q8NGC7 330 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 GFRA4Q9GZZ7 299 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 A0A0G2JNJ9 132 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 A0A1W2PPI3 338 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 K7ENP7 123 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 LCNL1Q6ZST4 164 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 EEF1AKMT3Q96AZ1 226 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 Q9UFV3 132 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 ACACBO00763 2458 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 IGKV1-5P01602 117 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 LINC00305Q7Z4B0 112 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 TEX45Q8NA69 505 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 ANAPC1Q9H1A4 1944 aa6.93□□□□□ -1.3
PBRM1-209ENST00000412587 D6R8Y8 96 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 PHF3Q92576 2039 aaKnown RBP6.92□□□□□ -1.3
PBRM1-209ENST00000412587 SRRM5B3KS81 715 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 DNAL4O96015 105 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 TRGV3P03979 118 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 TFF1P04155 84 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 NPPCP23582 126 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 IGKV1-12A0A0C4DH73 117 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 TCRBV4S1A1TA0A5B7 111 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 CEACAM4O75871 244 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 IGKV1D-12P01611 117 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 ZNF672Q499Z4 452 aaPredicted RBP6.92□□□□□ -1.3
PBRM1-209ENST00000412587 ZNF497Q6ZNH5 498 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 TMEM133Q9H2Q1 129 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 NBL1P41271 181 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 TMEM190Q8WZ59 177 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 HIGD1BQ9P298 99 aa6.92□□□□□ -1.3
PBRM1-209ENST00000412587 A4D1N5 150 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 MGPP08493 103 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 IFI27P40305 119 aaPredicted RBP6.91□□□□□ -1.3
PBRM1-209ENST00000412587 FHL1Q13642 323 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 CT83Q5H943 113 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 WIPF3A6NGB9 483 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 NPYP01303 97 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 GLMPQ8WWB7 406 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 IFI27L2Q9H2X8 130 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
PBRM1-209ENST00000412587 NOTCH2Q04721 2471 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 PRB3Q04118 309 aaPredicted RBP6.91□□□□□ -1.3
PBRM1-209ENST00000412587 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 K7EN84 100 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 SAA2P0DJI9 122 aaPredicted RBP6.91□□□□□ -1.3
PBRM1-209ENST00000412587 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
PBRM1-209ENST00000412587 Q6ZRM9 215 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 V9GYY9 64 aa6.91□□□□□ -1.3
PBRM1-209ENST00000412587 PLXNA4Q9HCM2 1894 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 CGB1A6NKQ9 187 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 FXYD2P54710 66 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 SRSF1Q07955 248 aaKnown RBP eCLIP6.9□□□□□ -1.3
PBRM1-209ENST00000412587 ZNF474Q6S9Z5 364 aaPredicted RBP6.9□□□□□ -1.3
PBRM1-209ENST00000412587 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 DUX5Q96PT3 197 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 CACNA1AO00555 2505 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 NPFFO15130 113 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 NDUFC2O95298 119 aa6.9□□□□□ -1.3
PBRM1-209ENST00000412587 EFNA4P52798 201 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms