RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 OR8A1Q8NGG7 326 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 OR10J6PQ8NGY7 276 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 SHANK2-AS3Q9BTD1 123 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
MRPL55-220ENST00000411464 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
MRPL55-220ENST00000411464 STRAPQ9Y3F4 350 aaKnown RBP11.65□□□□□ -0.54
MRPL55-220ENST00000411464 H3BRN7 92 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 HYPMO75409 117 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 CXCL3P19876 107 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 FAUP35544 74 aaKnown RBP11.64□□□□□ -0.55
MRPL55-220ENST00000411464 INPP1P49441 399 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 OR5I1Q13606 314 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 ACOT7LQ6ZUV0 252 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-220ENST00000411464 CCDC32Q9BV29 185 aa11.64□□□□□ -0.55
MRPL55-220ENST00000411464 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 ADAP1O75689 374 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 OR5G3P0C626 314 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 CDKN1BP46527 198 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 AP3S2P59780 193 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 PSG3Q16557 428 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 CYP2G1PQ6ZSU1 146 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 UHRF2Q96PU4 802 aa11.63□□□□□ -0.55
MRPL55-220ENST00000411464 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
MRPL55-220ENST00000411464 LINC00854A0A1B0GVQ3 168 aa11.62□□□□□ -0.55
MRPL55-220ENST00000411464 H3BP45 60 aa11.62□□□□□ -0.55
MRPL55-220ENST00000411464 TMEM263Q8WUH6 116 aaKnown RBP11.62□□□□□ -0.55
MRPL55-220ENST00000411464 A0A087X0K7 114 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 H7BYZ3 331 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 HOXB5P09067 269 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 LINC00869P0C866 280 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 ANXA7P20073 488 aaKnown RBP11.61□□□□□ -0.55
MRPL55-220ENST00000411464 M6PRP20645 277 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 RNASE8Q8TDE3 154 aaKnown RBP11.61□□□□□ -0.55
MRPL55-220ENST00000411464 RXFP4Q8TDU9 374 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
MRPL55-220ENST00000411464 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 Q9H3A6 140 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
MRPL55-220ENST00000411464 A0A0J9YY99 117 aa11.6□□□□□ -0.55
MRPL55-220ENST00000411464 UPK1BO75841 260 aa11.6□□□□□ -0.55
MRPL55-220ENST00000411464 PLP1P60201 277 aa11.6□□□□□ -0.55
MRPL55-220ENST00000411464 SELENOTP62341 195 aa11.6□□□□□ -0.55
MRPL55-220ENST00000411464 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
MRPL55-220ENST00000411464 A0A1W2PPQ1 181 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 SFT2D2O95562 160 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-220ENST00000411464 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
MRPL55-220ENST00000411464 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 IFITM3Q01628 133 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 C20orf144Q9BQM9 153 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 SLC25A21Q9BQT8 299 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-220ENST00000411464 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
MRPL55-220ENST00000411464 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 PMS2P5A8MQ11 134 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 PLA2G10O15496 165 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 GAGE7O76087 117 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 RLN2P04090 185 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 DLK1P80370 383 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 ESRGQ1W209 222 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 DEDD2Q8WXF8 326 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 ARL6Q9H0F7 186 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 PSENENQ9NZ42 101 aa11.58□□□□□ -0.56
MRPL55-220ENST00000411464 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
MRPL55-220ENST00000411464 CXCL2P19875 107 aa11.57□□□□□ -0.56
MRPL55-220ENST00000411464 POLR2GP62487 172 aaKnown RBP eCLIP11.57□□□□□ -0.56
MRPL55-220ENST00000411464 ID3Q02535 119 aa11.57□□□□□ -0.56
MRPL55-220ENST00000411464 LINC00612Q8N6U2 182 aa11.57□□□□□ -0.56
MRPL55-220ENST00000411464 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
MRPL55-220ENST00000411464 CENPXA8MT69 81 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 H3BNG1 76 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 LYRM1O43325 122 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 HOXA5P20719 270 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 RRAS2P62070 204 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-220ENST00000411464 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 SLC50A1Q9BRV3 221 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-220ENST00000411464 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
MRPL55-220ENST00000411464 BTCP35070 178 aa11.55□□□□□ -0.56
MRPL55-220ENST00000411464 ASAH1Q13510 395 aa11.55□□□□□ -0.56
MRPL55-220ENST00000411464 KIR3DS1Q14943 382 aa11.55□□□□□ -0.56
MRPL55-220ENST00000411464 PXDC1Q5TGL8 231 aa11.55□□□□□ -0.56
MRPL55-220ENST00000411464 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
MRPL55-220ENST00000411464 SSSCA1O60232 199 aa11.54□□□□□ -0.56
MRPL55-220ENST00000411464 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
MRPL55-220ENST00000411464 GFI1BQ5VTD9 330 aa11.54□□□□□ -0.56
MRPL55-220ENST00000411464 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
MRPL55-220ENST00000411464 OR10P1Q8NGE3 313 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms