RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 IGLV11-55A0A075B6I3 123 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 ZNF138P52744 262 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 RELQ04864 619 aaPredicted RBP8.44□□□□□ -1.06
CLIP4-204ENST00000404424 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 COX8CQ7Z4L0 72 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 OR10AG1Q8NH19 301 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 TIMD4Q96H15 378 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 SCRT2Q9NQ03 307 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 HILPDAQ9Y5L2 63 aa8.44□□□□□ -1.06
CLIP4-204ENST00000404424 ODF3BA8MYP8 253 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 CCL25O15444 150 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 CSN3P07498 182 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 SFTPCP11686 197 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 ARF6P62330 175 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 TTC9CQ8N5M4 171 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 THYN1Q9P016 225 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 TTC28Q96AY4 2481 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 M0R3E3 92 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 SCGB2A1O75556 95 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 PRTN3P24158 256 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 SAPCD1Q5SSQ6 148 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 IGFBPL1Q8WX77 278 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 ZNF747Q9BV97 191 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 ABCA1O95477 2261 aa8.43□□□□□ -1.06
CLIP4-204ENST00000404424 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 K7ENP7 123 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 RPL7P18124 248 aaKnown RBP8.42□□□□□ -1.06
CLIP4-204ENST00000404424 HES1Q14469 280 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 CCDC144NLQ6NUI1 221 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 POLEQ07864 2286 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 S100A7P31151 101 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 NBL1P41271 181 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 KLF17Q5JT82 389 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-204ENST00000404424 ARPC1AQ92747 370 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 U3KQK5 164 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 MGAQ8IWI9 3026 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 ACACAQ13085 2346 aa8.42□□□□□ -1.06
CLIP4-204ENST00000404424 LOC105371242A0A075B767 164 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 OOSP1A8MZH6 123 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 NUDT3O95989 172 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 TPPP3Q9BW30 176 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 MAP1BP46821 2468 aaKnown RBP8.41□□□□□ -1.06
CLIP4-204ENST00000404424 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 FAM90A27PA6NNH2 459 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-204ENST00000404424 RPS20P60866 119 aaKnown RBP8.41□□□□□ -1.06
CLIP4-204ENST00000404424 HIST1H1AQ02539 215 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-204ENST00000404424 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 C1orf122Q6ZSJ8 110 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 DPF1Q92782 380 aa8.41□□□□□ -1.06
CLIP4-204ENST00000404424 DMXL1Q9Y485 3027 aa8.4□□□□□ -1.06
CLIP4-204ENST00000404424 SH2D1AO60880 128 aa8.4□□□□□ -1.06
CLIP4-204ENST00000404424 FBLN7Q53RD9 439 aa8.4□□□□□ -1.06
CLIP4-204ENST00000404424 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
CLIP4-204ENST00000404424 ASCL2Q99929 193 aa8.4□□□□□ -1.06
CLIP4-204ENST00000404424 D6R8Y8 96 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 H0Y8G0 127 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 COX8AP10176 69 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 BMI1P35226 326 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.07
CLIP4-204ENST00000404424 KLRD1Q13241 179 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 EBI3Q14213 229 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 Q6ZVH6 145 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 DEFB125Q8N687 156 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 PRR25Q96S07 402 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 S4R3C0 116 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 APC2O95996 2303 aa8.4□□□□□ -1.07
CLIP4-204ENST00000404424 SRSF2Q01130 221 aaKnown RBP8.39□□□□□ -1.07
CLIP4-204ENST00000404424 MINOS1Q5TGZ0 78 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 BCL6BQ8N143 479 aaPredicted RBP8.39□□□□□ -1.07
CLIP4-204ENST00000404424 Q8N6K4 173 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 PRELID3AQ96N28 172 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 MINOS1-NBL1R4GNA1 71 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 GRNP28799 593 aaKnown RBP8.39□□□□□ -1.07
CLIP4-204ENST00000404424 SIGLEC8Q9NYZ4 499 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 RABAC1Q9UI14 185 aa8.39□□□□□ -1.07
CLIP4-204ENST00000404424 TIMM8BQ9Y5J9 83 aaPredicted RBP8.39□□□□□ -1.07
CLIP4-204ENST00000404424 TMEM213A2RRL7 107 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 NCBP2LA6PVI3 153 aaKnown RBP8.38□□□□□ -1.07
CLIP4-204ENST00000404424 K7EP13 123 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 NDPQ00604 133 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 LGALS9BQ3B8N2 356 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 LGALS9CQ6DKI2 356 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 AMN1Q8IY45 258 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 MCRIP2Q9BUT9 160 aaKnown RBP8.38□□□□□ -1.07
CLIP4-204ENST00000404424 A0A096LNJ9 63 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 CD5LO43866 347 aa8.38□□□□□ -1.07
CLIP4-204ENST00000404424 CTSGP08311 255 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms