RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 SLC25A15Q9Y619 301 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 TRIOO75962 3097 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 C17orf100A8MU93 164 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 SNCGO76070 127 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 APOMO95445 188 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 PVRIGQ6DKI7 326 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
HMGA2-204ENST00000403681 H7C2G1 150 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 CKS1BP61024 79 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 RHOGP84095 191 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 NDUFS8O00217 210 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 DLX1P56177 255 aa11.23□□□□□ -0.61
HMGA2-204ENST00000403681 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
HMGA2-204ENST00000403681 LINC01545Q5VT33 79 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 CLEC2AQ6UVW9 174 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 Q8N976 141 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 DDB2Q92466 427 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 MED13Q9UHV7 2174 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
HMGA2-204ENST00000403681 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
HMGA2-204ENST00000403681 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 RAXQ9Y2V3 346 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 IGHV3OR16-13A0A075B7E8 117 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 IGHV3-74A0A0B4J1X5 117 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 PRSS46E5RG02 174 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 ECSCRQ19T08 205 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 Q8N7P7 452 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 SMPXQ9UHP9 88 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
HMGA2-204ENST00000403681 SH2D1AO60880 128 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 EIF4EBP1Q13541 118 aaPredicted RBP11.21□□□□□ -0.61
HMGA2-204ENST00000403681 ETDBQ3ZM63 59 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.61
HMGA2-204ENST00000403681 PATE2Q6UY27 113 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 LTAP01374 205 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 COL8A2P25067 703 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 GTSF1Q8WW33 167 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 C21orf62Q9NYP8 219 aa11.21□□□□□ -0.61
HMGA2-204ENST00000403681 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
HMGA2-204ENST00000403681 SZT2Q5T011 3432 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
HMGA2-204ENST00000403681 AZU1P20160 251 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 C1RLQ9NZP8 487 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 PCNX2A6NKB5 2137 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 IGKV3-7A0A075B6H7 116 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
HMGA2-204ENST00000403681 CCL21O00585 134 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 THAP8Q8NA92 274 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 Q8TAT8 98 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 PSMB11A5LHX3 300 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 TGFAP01135 160 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 SPAARA0A1B0GVQ0 90 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 TRANK1O15050 2925 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
HMGA2-204ENST00000403681 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
HMGA2-204ENST00000403681 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
HMGA2-204ENST00000403681 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
HMGA2-204ENST00000403681 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 M0R381 172 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 SIVA1O15304 175 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 FAM120AOSQ5T036 256 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 TPSG1Q9NRR2 321 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 MALRD1Q5VYJ5 2156 aa11.18□□□□□ -0.62
HMGA2-204ENST00000403681 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 K7ERJ3 54 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 DLX6P56179 175 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 MBD6Q96DN6 1003 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 CYSLTR1Q9Y271 337 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
HMGA2-204ENST00000403681 IGHV3-49A0A0A0MS15 119 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.624e-8■■□□□ 13.1
HMGA2-204ENST00000403681 CD300EQ496F6 205 aaPredicted RBP11.17□□□□□ -0.62
HMGA2-204ENST00000403681 TTC32Q5I0X7 151 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 VGLL1Q99990 258 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 ACACAQ13085 2346 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms