RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 FREM2Q5SZK8 3169 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 IGHV3-72A0A0B4J1Y9 119 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 CDX4O14627 284 aaPredicted RBP7.36□□□□□ -1.23
UCA1-201ENST00000397381 CIDEAO60543 219 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 IGKV1-17P01599 117 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 IGHV1-8P0DP01 117 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 WT1P19544 449 aaPredicted RBP7.36□□□□□ -1.23
UCA1-201ENST00000397381 LOXP28300 417 aaPredicted RBP7.36□□□□□ -1.23
UCA1-201ENST00000397381 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 PPP1R27Q86WC6 154 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 TMEM133Q9H2Q1 129 aa7.36□□□□□ -1.23
UCA1-201ENST00000397381 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 FBLL1A6NHQ2 334 aaKnown RBP7.35□□□□□ -1.23
UCA1-201ENST00000397381 NDUFS7O75251 213 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 APELAP0DMC3 54 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 PDE6HQ13956 83 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 PLGLAQ15195 96 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 PLA2G2CQ5R387 149 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 TMEM108Q6UXF1 575 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 COX8CQ7Z4L0 72 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 AMN1Q8IY45 258 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 FAM215AQ9Y5M1 114 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 NBEAQ8NFP9 2946 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 LINC01546A6NGU7 62 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 MRPS12O15235 138 aaKnown RBP7.35□□□□□ -1.23
UCA1-201ENST00000397381 CEACAM4O75871 244 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 CNTFRP26992 372 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 NMUP48645 174 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 SAMD5Q5TGI4 173 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 LYPD2Q6UXB3 125 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 NAA38Q9BRA0 125 aaKnown RBP7.35□□□□□ -1.23
UCA1-201ENST00000397381 AAMDCQ9H7C9 122 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 KAAG1Q9UBP8 84 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 ARFGEF3Q5TH69 2177 aa7.35□□□□□ -1.23
UCA1-201ENST00000397381 SH2D1AO60880 128 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 CKS2P33552 79 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 ADIPOQQ15848 244 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 C8orf49Q96NF6 230 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 PRO3102Q9H379 93 aa7.34□□□□□ -1.23
UCA1-201ENST00000397381 SCGB1A1P11684 91 aa7.34□□□□□ -1.24
UCA1-201ENST00000397381 RNF125Q96EQ8 232 aa7.34□□□□□ -1.24
UCA1-201ENST00000397381 RNF5Q99942 180 aa7.34□□□□□ -1.24
UCA1-201ENST00000397381 ZMAT4Q9H898 229 aa7.34□□□□□ -1.24
UCA1-201ENST00000397381 CTSZQ9UBR2 303 aa7.34□□□□□ -1.24
UCA1-201ENST00000397381 PLCE1Q9P212 2302 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 IGHV1-3A0A0C4DH29 117 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 WI2-2373I1.2A0A1W2PRP0 233 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 VSTM5A8MXK1 200 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 K7EIM0 57 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 PLXNB1O43157 2135 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 NPYP01303 97 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 FAM27E3Q08E93 113 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 ZNF491Q8N8L2 437 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 ASCL2Q99929 193 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 RAB1BQ9H0U4 201 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 MAP1LC3AQ9H492 121 aa7.33□□□□□ -1.24
UCA1-201ENST00000397381 TMSB15BA0A087X1C1 80 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 HLA-DRB4P13762 266 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 BMI1P35226 326 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 SRSF2Q01130 221 aaKnown RBP7.32□□□□□ -1.24
UCA1-201ENST00000397381 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 BCL6BQ8N143 479 aaPredicted RBP7.32□□□□□ -1.24
UCA1-201ENST00000397381 CCL17Q92583 94 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 FBXL15Q9H469 300 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 DKK2Q9UBU2 259 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 SMPXQ9UHP9 88 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 HLA-DRB4X5D2U9 266 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 M0R3E3 92 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 IGLV1-47P01700 117 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 IL4P05112 153 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 FCER1GP30273 86 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 SRSF1Q07955 248 aaKnown RBP eCLIP7.32□□□□□ -1.24
UCA1-201ENST00000397381 SRSF6Q13247 344 aaKnown RBP7.32□□□□□ -1.24
UCA1-201ENST00000397381 TWIST1Q15672 202 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 SAMD13Q5VXD3 122 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 PRSS57Q6UWY2 283 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 WFDC8Q8IUA0 241 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 ICE1Q9Y2F5 2266 aa7.32□□□□□ -1.24
UCA1-201ENST00000397381 BUB1B-PAK6H3BSN5 160 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 EVI2AP22794 236 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 GCSHP23434 173 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 FCGR2BP31994 310 aaPredicted RBP7.31□□□□□ -1.24
UCA1-201ENST00000397381 TCTAP57738 103 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 FXYD7P58549 80 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 RPL24P83731 157 aaKnown RBP7.31□□□□□ -1.24
UCA1-201ENST00000397381 ODF1Q14990 250 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 NXT2Q9NPJ8 142 aaKnown RBP7.31□□□□□ -1.24
UCA1-201ENST00000397381 PRRC2CQ9Y520 2896 aaKnown RBP7.31□□□□□ -1.24
UCA1-201ENST00000397381 SMKR1H3BMG3 65 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 ATP5LO75964 103 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 PRSS33Q8NF86 280 aa7.31□□□□□ -1.24
UCA1-201ENST00000397381 PRR25Q96S07 402 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms