RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CORTO00230 105 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 ISLRO14498 428 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 MT-ND6P03923 174 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 TAS2R60P59551 318 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 SSTP61278 116 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 OR8I2Q8N0Y5 310 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 KIR2DL5AQ8N109 375 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 FNDC4Q9H6D8 234 aaPredicted RBP11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 SNURFLB1AK76 121 aa11.54□□□□□ -0.56
TM9SF1-202ENST00000396854 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
TM9SF1-202ENST00000396854 SUMO1P63165 101 aaKnown RBP11.54□□□□□ -0.56
TM9SF1-202ENST00000396854 COX19Q49B96 90 aa11.54□□□□□ -0.56
TM9SF1-202ENST00000396854 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
TM9SF1-202ENST00000396854 SERF1AO75920 110 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 IGLV1-40P01703 118 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 MISP3Q96FF7 219 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 RNASE7Q9H1E1 156 aaKnown RBP11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 NIPBLQ6KC79 2804 aaeCLIP11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 SNRPCP09234 159 aaKnown RBP11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
TM9SF1-202ENST00000396854 TMEM89A2RUT3 159 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 IGHG4P01861 327 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 SLC35B1P78383 322 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 MORN5Q5VZ52 161 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 Q6ZWC4 215 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 OR1L4Q8NGR5 311 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 THYN1Q9P016 225 aa11.52□□□□□ -0.57
TM9SF1-202ENST00000396854 SMIM27A0A1W2PRY6 76 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 SRSF2Q01130 221 aaKnown RBP11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 IBA57Q5T440 356 aaKnown RBP11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 LINC01006Q8NI28 216 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 TRAV5A0A0B4J249 113 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 I3L2K1 104 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 PSMB8P28062 276 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 BAGE3Q86Y29 109 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 BAGE2Q86Y30 109 aa11.51□□□□□ -0.57
TM9SF1-202ENST00000396854 IGKV1D-37A0A075B6S9 117 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 K7EIM0 57 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 C10orf113Q5VZT2 155 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 OR2J3O76001 311 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 RHOGP84095 191 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 RNF152Q8N8N0 203 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 PAXXQ9BUH6 204 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 MRPL36Q9P0J6 103 aaKnown RBP11.5□□□□□ -0.57
TM9SF1-202ENST00000396854 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 ZNF705FA8MVS1 300 aaPredicted RBP11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 F2Z2F3 143 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 ELANEP08246 267 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 ZNF705DP0CH99 300 aaPredicted RBP11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 ZNF705BP0CI00 300 aaPredicted RBP11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 MGST1P10620 155 aaKnown RBP11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 FOXE3Q13461 319 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 NPIPB3Q92617 1050 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 FBXL7Q9UJT9 491 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 C2CD3Q4AC94 2353 aa11.49□□□□□ -0.57
TM9SF1-202ENST00000396854 EREGO14944 169 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 NDUFB8O95169 186 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 TRGV3P03979 118 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 RAB9AP51151 201 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 FAM231DQ6ZW35 169 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 KLHDC1Q8N7A1 406 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 VN1R17PQ8TDU5 208 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 CLPSL1A2RUU4 121 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 IZUMO1RA6ND01 250 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 PYYP10082 97 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 PF4V1P10720 104 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 TOMM20LQ6UXN7 152 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 FXYD5Q96DB9 178 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 TRGV9Q99603 122 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 KLK15Q9H2R5 256 aa11.48□□□□□ -0.57
TM9SF1-202ENST00000396854 PEX7O00628 323 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 TCL1AP56279 114 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms