RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 YPEL2Q96QA6 119 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 A0A087WWL8 130 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 FCN3O75636 299 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 CD24P25063 80 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 PRCDQ00LT1 54 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
COL4A4-201ENST00000396625 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
COL4A4-201ENST00000396625 RPUSD1Q9UJJ7 312 aaKnown RBP8.54□□□□□ -1.04
COL4A4-201ENST00000396625 A0A1W2PR77 199 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 A0A1B0GTI1 187 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 PRSS57Q6UWY2 283 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 MORN2Q502X0 79 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 WFDC1Q9HC57 220 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 COLCA2A8K830 154 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 C3orf79P0CE67 100 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 SPSB3Q6PJ21 355 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 CDKN1AP38936 164 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 C1QTNF5Q9BXJ0 243 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 MYO9AB2RTY4 2548 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 NRN1LQ496H8 165 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 SS18L2Q9UHA2 77 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 LILRA6Q6PI73 481 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 Q8TAT8 98 aa8.53□□□□□ -1.04
COL4A4-201ENST00000396625 TRBV6-7A0A0A0MS04 114 aa8.52□□□□□ -1.04
COL4A4-201ENST00000396625 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 STPG1Q5TH74 334 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 PLXNA4Q9HCM2 1894 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 ZNF138P52744 262 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 STPG4Q8N801 248 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 IL9P15248 144 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 BOD1L2Q8IYS8 172 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 ANKRD29Q8N6D5 301 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 SIP14410 1827 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 NUP210LQ5VU65 1888 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 AGMATQ9BSE5 352 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 IGHG2P01859 326 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 IGKV1D-13A0A0B4J2D9 117 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 IGKV1-13P0DP09 117 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 LINC01590Q5TEZ4 76 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 HIVEP3Q5T1R4 2406 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 PTPRBP23467 1997 aa8.52□□□□□ -1.05
COL4A4-201ENST00000396625 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
COL4A4-201ENST00000396625 TRBV7-1A0A0A6YYK4 115 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 K7EP34 96 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 WNT2P09544 360 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
COL4A4-201ENST00000396625 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 TRAV40A0A0B4J280 105 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.51□□□□□ -1.05
COL4A4-201ENST00000396625 WFDC9Q8NEX5 89 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 TRGV9Q99603 122 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 FGF6P10767 208 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 BRWD3Q6RI45 1802 aa8.51□□□□□ -1.05
COL4A4-201ENST00000396625 PRB2P02812 416 aaPredicted RBP8.51□□□□□ -1.05
COL4A4-201ENST00000396625 KIAA1671Q9BY89 1806 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 TREML4Q6UXN2 200 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 SMRP1Q8NCR6 262 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 K7EP13 123 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 FOXG1P55316 489 aaPredicted RBP8.5□□□□□ -1.05
COL4A4-201ENST00000396625 CCL3L1P16619 93 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 BTCP35070 178 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 KLRD1Q13241 179 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 GLRX5Q86SX6 157 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 ZNF664Q8N3J9 261 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 BMPERQ8N8U9 685 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 MCRIP2Q9BUT9 160 aaKnown RBP8.5□□□□□ -1.05
COL4A4-201ENST00000396625 ANXA2RQ3ZCQ2 193 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 A8MWP6 167 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 EREGO14944 169 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 LY6G6FQ5SQ64 297 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 TMEM243Q9BU79 118 aa8.5□□□□□ -1.05
COL4A4-201ENST00000396625 NDPQ00604 133 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TIMM23O14925 209 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 PFN2P35080 140 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 SLAQ13239 276 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 C11orf44Q8N8P7 122 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 GAGE7O76087 117 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 GAGE12FP0CL80 117 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 GAGE12GP0CL81 117 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 GAGE12IP0CL82 117 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 PYY3Q5JQD4 70 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 C1orf53Q5VUE5 145 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 SPATA31B1PQ5VZV4 182 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TMEM219Q86XT9 240 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 FGF16O43320 207 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
COL4A4-201ENST00000396625 SRSF7Q16629 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms