RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 LY6EQ16553 131 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 CLEC19AQ6UXS0 136 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
CBX3-202ENST00000396386 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 M0QZK8 103 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 P01737 135 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 CLEC3BP05452 202 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 TOMM20LQ6UXN7 152 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 LINC01356Q8N9X3 169 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
CBX3-202ENST00000396386 ATP6V0BQ99437 205 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
CBX3-202ENST00000396386 SOX21Q9Y651 276 aaPredicted RBP11.61□□□□□ -0.55
CBX3-202ENST00000396386 IGHV3-35A0A0C4DH35 117 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 SERTM2A0A1B0GWG4 89 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 RAB9AP51151 201 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 RAB4BP61018 213 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 PSG3Q16557 428 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 GBGT1Q8N5D6 347 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
CBX3-202ENST00000396386 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 NEU1Q99519 415 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 PRSS22Q9GZN4 317 aa11.61□□□□□ -0.55
CBX3-202ENST00000396386 NBPF19A0A087WUL8 3843 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 A0A096LNT2 108 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 ZNF253O75346 499 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 IGF1P05019 195 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 CSN1S1P47710 185 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 LINC00322Q6ZN03 302 aaPredicted RBP11.6□□□□□ -0.55
CBX3-202ENST00000396386 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
CBX3-202ENST00000396386 USP9YO00507 2555 aaPredicted RBP11.6□□□□□ -0.55
CBX3-202ENST00000396386 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 A8MWL6 223 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 M0R3E3 92 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 CRISP2P16562 243 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 RELQ04864 619 aaPredicted RBP11.59□□□□□ -0.55
CBX3-202ENST00000396386 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
CBX3-202ENST00000396386 SPTAN1Q13813 2472 aaKnown RBP11.59□□□□□ -0.55
CBX3-202ENST00000396386 J3QLI3 93 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 AVPP01185 164 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 IGHG2P01859 326 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 TRGV3P03979 118 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 COL8A1P27658 744 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 ATP5L2Q7Z4Y8 100 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 LINC00527Q9UJ94 153 aa11.59□□□□□ -0.55
CBX3-202ENST00000396386 A0A1B0GUS0 222 aa11.58□□□□□ -0.56
CBX3-202ENST00000396386 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
CBX3-202ENST00000396386 H3BUA1 57 aa11.58□□□□□ -0.56
CBX3-202ENST00000396386 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
CBX3-202ENST00000396386 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
CBX3-202ENST00000396386 UTP20O75691 2785 aaKnown RBP11.58□□□□□ -0.56
CBX3-202ENST00000396386 A0A087X0K7 114 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 TPPP2P59282 170 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 TMEM256Q8N2U0 113 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 ZC2HC1AQ96GY0 325 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 GFRA4Q9GZZ7 299 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 BRI3O95415 125 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 APCSP02743 223 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 Q0VG73 95 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 TCF24Q7RTU0 167 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 NOL4LQ96MY1 436 aaPredicted RBP11.57□□□□□ -0.56
CBX3-202ENST00000396386 METTL26Q96S19 204 aa11.57□□□□□ -0.56
CBX3-202ENST00000396386 CLPSL1A2RUU4 121 aa11.56□□□□□ -0.56
CBX3-202ENST00000396386 FBLL1A6NHQ2 334 aaKnown RBP11.56□□□□□ -0.56
CBX3-202ENST00000396386 BUB3O43684 328 aa11.56□□□□□ -0.56
CBX3-202ENST00000396386 LOXL1Q08397 574 aaPredicted RBP11.56□□□□□ -0.56
CBX3-202ENST00000396386 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
CBX3-202ENST00000396386 Q71RC1 249 aaPredicted RBP11.56□□□□□ -0.56
CBX3-202ENST00000396386 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
CBX3-202ENST00000396386 TP53TG3Q9ULZ0 132 aa11.56□□□□□ -0.56
CBX3-202ENST00000396386 TEX15Q9BXT5 2789 aa11.56□□□□□ -0.56
CBX3-202ENST00000396386 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 CHEK1O14757 476 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 BAGE3Q86Y29 109 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 OR2D3Q8NGH3 330 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 IGKV2-40A0A087WW87 121 aaPredicted RBP11.55□□□□□ -0.56
CBX3-202ENST00000396386 IGKV2D-40P01614 121 aaPredicted RBP11.55□□□□□ -0.56
CBX3-202ENST00000396386 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
CBX3-202ENST00000396386 ARL3P36405 182 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 JOSD1Q15040 202 aaPredicted RBP11.55□□□□□ -0.56
CBX3-202ENST00000396386 KIAA1644Q3SXP7 199 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 OR10J3Q5JRS4 329 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 CDPF1Q6NVV7 123 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
CBX3-202ENST00000396386 GTSF1Q8WW33 167 aa11.55□□□□□ -0.56
CBX3-202ENST00000396386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.55□□□□□ -0.562e-60■■■■□ 26
CBX3-202ENST00000396386 SERF1AO75920 110 aa11.54□□□□□ -0.56
CBX3-202ENST00000396386 TGFAP01135 160 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms