RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LRRC37A5PQ49AS3 106 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 H2BFWTQ7Z2G1 175 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 SEPSECSQ9HD40 501 aaKnown RBP9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 U3KQE9 123 aa9.44□□□□□ -0.9
VCPKMT-201ENST00000395859 LOC102723971A0A1B0GUV8 181 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 GNG7O60262 68 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 TSC22D2O75157 780 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 RPL12P30050 165 aaKnown RBP9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 LINC00315P59091 139 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 RAB14P61106 215 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 VAMP2P63027 116 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 HAMPP81172 84 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF114Q8NC26 417 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF680Q8NEM1 530 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 OR4A16Q8NH70 328 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 RNF141Q8WVD5 230 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 GPR146Q96CH1 333 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 LYRM2Q9NU23 88 aaPredicted RBP9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
VCPKMT-201ENST00000395859 IGHV3OR16-12A0A075B7B8 117 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 H0YIZ8 118 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 SYNGR2O43760 224 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 IGKV1-39P01597 117 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 IGKV1-5P01602 117 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 IGKV1D-39P04432 117 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 NPPCP23582 126 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 RPP30P78346 268 aaKnown RBP9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 SMIM8Q96KF7 97 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 PRR13Q9NZ81 148 aa9.42□□□□□ -0.9
VCPKMT-201ENST00000395859 BORCS7-ASMTA0A0B4J1R7 106 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 ERHP84090 104 aaKnown RBP9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF266Q14584 549 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 STX12Q86Y82 276 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 GLMPQ8WWB7 406 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 OR5AC2Q9NZP5 309 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 CACNG5Q9UF02 275 aa9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 LSM5Q9Y4Y9 91 aaKnown RBP9.41□□□□□ -0.9
VCPKMT-201ENST00000395859 TMEM50AO95807 157 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 SCGB1D2O95969 90 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 HBE1P02100 147 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 FXYD7P58549 80 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 SPCS3P61009 180 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 HBG1P69891 147 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 HBG2P69892 147 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 PRCDQ00LT1 54 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 MISP3Q96FF7 219 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 ZNF586Q9NXT0 402 aa9.4□□□□□ -0.9
VCPKMT-201ENST00000395859 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 INS-IGF2F8WCM5 200 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 BAP18Q8IXM2 172 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 METTL26Q96S19 204 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
VCPKMT-201ENST00000395859 F5H768 121 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 IFNA5P01569 189 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 NPBWR1P48145 328 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 SULT1A1P50225 295 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 RAB5CP51148 216 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 DEFB1P60022 68 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 ERVFC1-1P60608 527 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 ATP6V1FQ16864 119 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 DEFB104AQ8WTQ1 72 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 TMEM70Q9BUB7 260 aa9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 ZNF471Q9BX82 626 aaPredicted RBP9.38□□□□□ -0.91
VCPKMT-201ENST00000395859 A0A087WTM6 91 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 PLAC8L1A1L4L8 177 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 SSSCA1O60232 199 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 GCSHP23434 173 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 SNCAP37840 140 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 SNRPD3P62318 126 aaKnown RBP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 ESRGQ1W209 222 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 PINX1Q96BK5 328 aaKnown RBP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 GGACTQ9BVM4 153 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 MRPL36Q9P0J6 103 aaKnown RBP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
VCPKMT-201ENST00000395859 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 CORTO00230 105 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 EREGO14944 169 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 SEC11BP0C7V7 166 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 CAV2P51636 162 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms