RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 CNFNQ9BYD5 112 aa10.86□□□□□ -0.67
CDC42SE2-202ENST00000395246 C16orf95Q9H693 158 aa10.86□□□□□ -0.67
CDC42SE2-202ENST00000395246 RP1L1Q8IWN7 2480 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE2-202ENST00000395246 FRZBQ92765 325 aa10.86□□□□□ -0.67
CDC42SE2-202ENST00000395246 Q96MF0 132 aa10.86□□□□□ -0.67
CDC42SE2-202ENST00000395246 IGHV3-21A0A0B4J1V1 117 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 Q0VG73 95 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 NUDT10Q8NFP7 164 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 NUDT11Q96G61 164 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 Q6ZS46 218 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 S100A8P05109 93 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 COL12A1Q99715 3063 aa10.85□□□□□ -0.67
CDC42SE2-202ENST00000395246 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 A8MTW9 85 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 IGHV4-59P01825 116 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 TRGC2P03986 189 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 CEBPGP53567 150 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 BLCAPP62952 87 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 BAGE2Q86Y30 109 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.67
CDC42SE2-202ENST00000395246 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 TRGC1P0CF51 173 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 WDR73Q6P4I2 378 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 LINC00518Q8N0U6 118 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 LINC00479Q96M42 142 aa10.83□□□□□ -0.67
CDC42SE2-202ENST00000395246 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 GPR183P32249 361 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 HIST3H2BBQ8N257 126 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 TGFAP01135 160 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 CRIP1P50238 77 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 KLF5Q13887 457 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 Q6AWC8 147 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 IQCF2Q8IXL9 164 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 SERTAD4Q9NUC0 356 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 ACACBO00763 2458 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 APCP25054 2843 aa10.83□□□□□ -0.68
CDC42SE2-202ENST00000395246 ROS1P08922 2347 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 A0A1B0GW15 77 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 GNG5P63218 68 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 RPP21Q9H633 154 aaKnown RBP10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 HAX1O00165 279 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 ZNF493Q6ZR52 646 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 NAT8BQ9UHF3 227 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 CRYBG3Q68DQ2 2970 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 A1L4Q6 167 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 TRGV3P03979 118 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
CDC42SE2-202ENST00000395246 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 METTL26Q96S19 204 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 PSG8Q9UQ74 426 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 RPS10P46783 165 aaKnown RBP10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 EXOC3-AS1Q8N2X6 119 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 ARL3P36405 182 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 ERVFC1-1P60608 527 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 OR10J3Q5JRS4 329 aa10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
CDC42SE2-202ENST00000395246 K7EQM0 130 aa10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 IGHV7-4-1A0A0J9YVY3 117 aa10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 COL8A1P27658 744 aa10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
CDC42SE2-202ENST00000395246 IGHV3OR16-10A0A075B7F0 116 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 UBE2G1P62253 170 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 GTSF1Q8WW33 167 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 PRR25Q96S07 402 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 KLK15Q9H2R5 256 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 AAMDCQ9H7C9 122 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 PEF1Q9UBV8 284 aaKnown RBP10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 LINC01559Q495D7 138 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 LINC01546A6NGU7 62 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 CHEK1O14757 476 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 CSMD1Q96PZ7 3565 aa10.79□□□□□ -0.68
CDC42SE2-202ENST00000395246 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 CTRLP40313 264 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 SNRPEP62304 92 aaKnown RBP10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 BLNKQ8WV28 456 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 NOL4LQ96MY1 436 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 LINC00310P59036 64 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 TPPP2P59282 170 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 OR4X2Q8NGF9 303 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms