RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 PLXNB2O15031 1838 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 MYO18BQ8IUG5 2567 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 C3orf85A0A1B0GTC6 90 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 ZFC3H1O60293 1989 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 TPT1P13693 172 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 C1orf140Q5VVS0 124 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 NR2C2APQ86WQ0 139 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 RFESDQ8TAC1 157 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 VGLL1Q99990 258 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 SCRT1Q9BWW7 348 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 PARLQ9H300 379 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 ZNF835Q9Y2P0 537 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 DMDP11532 3685 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TRAV12-2A0A075B6T6 113 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 IGHV1OR21-1A0A087WYE8 117 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 H3BSH0 61 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 H3BT86 120 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 PSMB3P49720 205 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TMEM91Q6ZNR0 172 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TMEM255BQ8WV15 326 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 PLAC1Q9HBJ0 212 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TXNL4BQ9NX01 149 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 OR5V1Q9UGF6 321 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 PI4KAP42356 2102 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 MYOFQ9NZM1 2061 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 XIRP2A4UGR9 3374 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 H3BMG7 143 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 NUPR1O60356 82 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 HLA-DRB4P13762 266 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 HLA-DOBP13765 273 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 ZNF20P17024 532 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 GNLYP22749 145 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 LINC00303Q3SY05 128 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 MORN5Q5VZ52 161 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 LINC00173Q6ZV60 143 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 Q8N2B8 174 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 RNASE6Q93091 150 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 RBMXL1Q96E39 390 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 GNPNAT1Q96EK6 184 aaPredicted RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 PARP12Q9H0J9 701 aaKnown RBP3.23□□□□□ -1.89
HERC4-204ENST00000395198 DPH3P1Q9H4G8 78 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 DYNLRB1Q9NP97 96 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 AIG1Q9NVV5 245 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 RNF114Q9Y508 228 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 KCNE3Q9Y6H6 103 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 HLA-DRB4X5D2U9 266 aa3.23□□□□□ -1.89
HERC4-204ENST00000395198 TRBV24-1A0A075B6N3 115 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 NAP1L6A6NFF2 107 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 TRACP01848 142 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 SEC11AP67812 179 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 GFRALQ6UXV0 394 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 OR5H2Q8NGV7 314 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 NINQ8N4C6 2090 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 A0A0G2JMZ2 1700 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 IGHV1-58A0A0C4DH39 117 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 IRGMA1A4Y4 181 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 K7ERJ3 54 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 ZNF101Q8IZC7 436 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 OR10AC1Q8NH08 325 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 LAMTOR3Q9UHA4 124 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 TANC2Q9HCD6 1990 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 MDC1Q14676 2089 aaKnown RBP3.22□□□□□ -1.89
HERC4-204ENST00000395198 A8MWL6 223 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 MRPL33O75394 65 aaKnown RBP3.22□□□□□ -1.89
HERC4-204ENST00000395198 SNCGO76070 127 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 CCL4P13236 92 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 Q6ZS49 121 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 KCNS1Q96KK3 526 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 TTTY10Q9BZA0 68 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 MRPL18Q9H0U6 180 aaKnown RBP3.22□□□□□ -1.89
HERC4-204ENST00000395198 NAA60Q9H7X0 242 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 LINC00527Q9UJ94 153 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 COL11A1P12107 1806 aaPredicted RBP3.22□□□□□ -1.89
HERC4-204ENST00000395198 TRAV17A0A0B4J275 112 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 ZNF737O75373 536 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 NMSQ5H8A3 153 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
HERC4-204ENST00000395198 K7EM74 188 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SYNGR2O43760 224 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 OR8B3Q8NGG8 313 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SCGB1C1Q8TD33 95 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 IL1F10Q8WWZ1 152 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SPRR3Q9UBC9 169 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 XCL2Q9UBD3 114 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SPG11Q96JI7 2443 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SHROOM3Q8TF72 1996 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 PTPRDP23468 1912 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 IGHV3OR16-9A0A0B4J2B5 98 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 IGHV5-51A0A0C4DH38 117 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SOD1P00441 154 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 COX7CP15954 63 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms