RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 SSTP61278 116 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 BLCAPP62952 87 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 TMEM136Q6ZRR5 245 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 FAM231DQ6ZW35 169 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 NUP35Q8NFH5 326 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 VN1R17PQ8TDU5 208 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 NAT8BQ9UHF3 227 aa11.7□□□□□ -0.54
GPC3-202ENST00000394299 ZNF207O43670 478 aaKnown RBP11.69□□□□□ -0.54
GPC3-202ENST00000394299 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 Q86TA4 180 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 GRAMD2BQ96HH9 432 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 NEU1Q99519 415 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
GPC3-202ENST00000394299 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
GPC3-202ENST00000394299 TRAV41A0A0B4J266 112 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 IZUMO1RA6ND01 250 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 B4DSR2 109 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
GPC3-202ENST00000394299 GZMBP10144 247 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 TXN2Q99757 166 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 GNB1LQ9BYB4 327 aa11.68□□□□□ -0.54
GPC3-202ENST00000394299 DIRC3C9JPN6 131 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 LINC00310P59036 64 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 C19orf71A6NCJ1 209 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 GTSF1Q8WW33 167 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 PRSS22Q9GZN4 317 aa11.67□□□□□ -0.54
GPC3-202ENST00000394299 CLPSL1A2RUU4 121 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
GPC3-202ENST00000394299 CRISP2P16562 243 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 CAMPP49913 170 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
GPC3-202ENST00000394299 PSG8Q9UQ74 426 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 NAV2Q8IVL1 2488 aa11.66□□□□□ -0.54
GPC3-202ENST00000394299 A0A096LNT2 108 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 A0A1B0GV90 55 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 A6NDX4 124 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 P01737 135 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 PAX1P15863 534 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 RPL19P84098 196 aaKnown RBP11.65□□□□□ -0.54
GPC3-202ENST00000394299 DEFA6Q01524 100 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 SLAQ13239 276 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 C19orf54Q5BKX5 351 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 C8orf49Q96NF6 230 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
GPC3-202ENST00000394299 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
GPC3-202ENST00000394299 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
GPC3-202ENST00000394299 IGHG4P01861 327 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 TRGV3P03979 118 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 CD33P20138 364 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 CRIP1P50238 77 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 ATP5G2Q06055 141 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 KLK9Q2XQG4 91 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
GPC3-202ENST00000394299 KLK15Q9H2R5 256 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 KLK9Q9UKQ9 250 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 RNF24Q9Y225 148 aa11.65□□□□□ -0.54
GPC3-202ENST00000394299 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 BMPR1BO00238 502 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 TGFAP01135 160 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
GPC3-202ENST00000394299 PSG3Q16557 428 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 C14orf144Q96I85 54 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 PGLYRP4Q96LB8 373 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 ZNF331Q9NQX6 463 aaPredicted RBP11.64□□□□□ -0.55
GPC3-202ENST00000394299 SERF1AO75920 110 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 ZNF124Q15973 351 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 AAMDCQ9H7C9 122 aa11.64□□□□□ -0.55
GPC3-202ENST00000394299 MXRA5Q9NR99 2828 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 BUB3O43684 328 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 IGHV3-11P01762 117 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 DSCR9P59020 149 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 TMEM95Q3KNT9 176 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 RNF182Q8N6D2 247 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
GPC3-202ENST00000394299 SCGB2A1O75556 95 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 SLC25A16P16260 332 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 BTF3P20290 206 aaKnown RBP11.62□□□□□ -0.55
GPC3-202ENST00000394299 SRIP30626 198 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 TPPP2P59282 170 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 WDR73Q6P4I2 378 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 Q8TAT8 98 aa11.62□□□□□ -0.55
GPC3-202ENST00000394299 VGLL1Q99990 258 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms