RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CRIP2P52943 208 aaPredicted RBP7.04□□□□□ -1.28
TDP1-202ENST00000393452 ATP5J2P56134 94 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 PKIAP61925 76 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 PSG3Q16557 428 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 KIAA1644Q3SXP7 199 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 C19orf54Q5BKX5 351 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 PRNTQ86SH4 94 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 BAGE3Q86Y29 109 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
TDP1-202ENST00000393452 SOX21Q9Y651 276 aaPredicted RBP7.04□□□□□ -1.28
TDP1-202ENST00000393452 IGHV4-30-2A0A087WSY4 118 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 K7EQM0 130 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 M0R3E3 92 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 PAX1P15863 534 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 SRIP30626 198 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 TPPP2P59282 170 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 SSTP61278 116 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 Q71RC1 249 aaPredicted RBP7.03□□□□□ -1.28
TDP1-202ENST00000393452 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
TDP1-202ENST00000393452 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 RABAC1Q9UI14 185 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 SERTM2A0A1B0GWG4 89 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 ZNF253O75346 499 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 COL8A1P27658 744 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 GPR183P32249 361 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
TDP1-202ENST00000393452 PSG9Q00887 426 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 DEFA6Q01524 100 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.282e-9■■■■■ 31.2
TDP1-202ENST00000393452 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 PSG8Q9UQ74 426 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 CHD6Q8TD26 2715 aa7.03□□□□□ -1.28
TDP1-202ENST00000393452 IGHV3OR16-10A0A075B7F0 116 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 SH2D7A6NKC9 451 aaPredicted RBP7.02□□□□□ -1.29
TDP1-202ENST00000393452 CLEC3BP05452 202 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 S100A7P31151 101 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 RBPMS2Q6ZRY4 209 aaKnown RBP7.02□□□□□ -1.29
TDP1-202ENST00000393452 ZC2HC1AQ96GY0 325 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 C14orf144Q96I85 54 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 SMAD5-AS1Q9Y6J3 95 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 FLNCQ14315 2725 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 TRBV7-1A0A0A6YYK4 115 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 RAB9AP51151 201 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 HBBP68871 147 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 BRD3OSQ6XYD6 125 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 Q6ZWC4 215 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 TMEM219Q86XT9 240 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 ZNF664Q8N3J9 261 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 C18orf32Q8TCD1 76 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 RCHY1Q96PM5 261 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
TDP1-202ENST00000393452 SVEP1Q4LDE5 3571 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 CLPSL1A2RUU4 121 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 A8MWP6 167 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 BUB3O43684 328 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 IGHG4P01861 327 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
TDP1-202ENST00000393452 GPX1P07203 203 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 MSMBP08118 114 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 IGHV4-38-2P0DP08 117 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 KLF5Q13887 457 aaPredicted RBP7.01□□□□□ -1.29
TDP1-202ENST00000393452 COX8CQ7Z4L0 72 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 KCNS1Q96KK3 526 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 A0A1B0GV90 55 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 A0A1W2PS18 150 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 CSN1S1P47710 185 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 CAMPP49913 170 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 CRIP1P50238 77 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 OR2D3Q8NGH3 330 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 EEF1AKMT3Q96AZ1 226 aa7.01□□□□□ -1.29
TDP1-202ENST00000393452 NOL4LQ96MY1 436 aaPredicted RBP7.01□□□□□ -1.29
TDP1-202ENST00000393452 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
TDP1-202ENST00000393452 A0A087X0K7 114 aa7□□□□□ -1.29
TDP1-202ENST00000393452 TRAV41A0A0B4J266 112 aa7□□□□□ -1.29
TDP1-202ENST00000393452 IGHV3-35A0A0C4DH35 117 aa7□□□□□ -1.29
TDP1-202ENST00000393452 FBLL1A6NHQ2 334 aaKnown RBP7□□□□□ -1.29
TDP1-202ENST00000393452 CLEC19AQ6UXS0 136 aa7□□□□□ -1.29
TDP1-202ENST00000393452 PGLYRP4Q96LB8 373 aa7□□□□□ -1.29
TDP1-202ENST00000393452 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
TDP1-202ENST00000393452 PRO1933Q9H354 126 aa7□□□□□ -1.29
TDP1-202ENST00000393452 NAGKQ9UJ70 344 aa7□□□□□ -1.29
TDP1-202ENST00000393452 IGHV3OR16-8A0A075B7F1 116 aa7□□□□□ -1.29
TDP1-202ENST00000393452 FAM223BA6NKX1 122 aa7□□□□□ -1.29
TDP1-202ENST00000393452 HAX1O00165 279 aa7□□□□□ -1.29
TDP1-202ENST00000393452 BRI3O95415 125 aa7□□□□□ -1.29
TDP1-202ENST00000393452 IGF1P05019 195 aa7□□□□□ -1.29
TDP1-202ENST00000393452 DDTP30046 118 aa7□□□□□ -1.29
TDP1-202ENST00000393452 DSCR9P59020 149 aa7□□□□□ -1.29
TDP1-202ENST00000393452 FAM223AQ8IWN6 122 aa7□□□□□ -1.29
TDP1-202ENST00000393452 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms