RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 GAGE2BQ13066 116 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 GAGE2EQ4V326 116 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 LURAP1LQ8IV03 231 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 PLEKHB2Q96CS7 222 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 GAGE2DQ9UEU5 116 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 MALP21145 153 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 EFNA4P52798 201 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 TMEM249Q2WGJ8 235 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 IGFL4Q6B9Z1 124 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 LIME1Q9H400 295 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 WDR90Q96KV7 1748 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 A0A1W2PPI3 338 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 LMO1P25800 156 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 NDPQ00604 133 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
LCA5-202ENST00000392959 C18orf32Q8TCD1 76 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
LCA5-202ENST00000392959 ARMS2P0C7Q2 107 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 TMEM86BQ8N661 226 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
LCA5-202ENST00000392959 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.71
LCA5-202ENST00000392959 GAGE12BA1L429 117 aa10.65□□□□□ -0.71
LCA5-202ENST00000392959 ADARB2-AS1A8MUL3 147 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 ZNF474Q6S9Z5 364 aaPredicted RBP10.64□□□□□ -0.71
LCA5-202ENST00000392959 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 M0R1W7 72 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 PDE6HQ13956 83 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 LYPD2Q6UXB3 125 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 DEFB104AQ8WTQ1 72 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
LCA5-202ENST00000392959 DLX4Q92988 240 aaPredicted RBP10.64□□□□□ -0.71
LCA5-202ENST00000392959 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 SIP14410 1827 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 WISP1O95388 367 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 C10orf91Q5T1B1 145 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 CSTL1Q9H114 145 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 Q9UFV3 132 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 COX11Q9Y6N1 276 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 PRTN3P24158 256 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 LINC00158P58513 81 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 CYYR1Q96J86 154 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 RCHY1Q96PM5 261 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
LCA5-202ENST00000392959 H3BUX3 64 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 FCN3O75636 299 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 IGKV1-39P01597 117 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 IGHV2-5P01817 119 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 IGKV1D-39P04432 117 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 ZNF726P1Q15940 193 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 STPG4Q8N801 248 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 SRSF8Q9BRL6 282 aaKnown RBP10.62□□□□□ -0.71
LCA5-202ENST00000392959 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 CRPP02741 224 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 CHAC1Q9BUX1 264 aa10.62□□□□□ -0.71
LCA5-202ENST00000392959 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.61□□□□□ -0.71
LCA5-202ENST00000392959 GTF3C1Q12789 2109 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 CT83Q5H943 113 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 ZFAND6Q6FIF0 208 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 Q6ZS92 163 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 ZNF524Q96C55 264 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 ZNRD1Q9P1U0 126 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 YPEL3P61236 119 aaPredicted RBP10.61□□□□□ -0.71
LCA5-202ENST00000392959 RPL36AP83881 106 aaKnown RBP10.61□□□□□ -0.71
LCA5-202ENST00000392959 RPL36ALQ969Q0 106 aaKnown RBP10.61□□□□□ -0.71
LCA5-202ENST00000392959 IGHV3-73A0A0B4J1V6 119 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 TNFRSF6BO95407 300 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 IGHV2-70P01814 119 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
LCA5-202ENST00000392959 NDUFS8O00217 210 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 NPC2P61916 151 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 ESDP10768 282 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 USMG5Q96IX5 58 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 NDUFA4L2Q9NRX3 87 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 BDP1A6H8Y1 2624 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 IGLC2P0DOY2 106 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 COL8A2P25067 703 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 LY6DQ14210 128 aa10.6□□□□□ -0.71
LCA5-202ENST00000392959 TMEM213A2RRL7 107 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 C3orf36Q3SXR2 165 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 ZNF562Q6V9R5 426 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 LY6HO94772 140 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 RSPO1Q2MKA7 263 aaPredicted RBP10.59□□□□□ -0.71
LCA5-202ENST00000392959 C2orf82Q6UX34 121 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 TMEM155Q4W5P6 130 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 PAX4O43316 350 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 CFHR2P36980 270 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
LCA5-202ENST00000392959 PTPRQQ9UMZ3 2332 aa10.58□□□□□ -0.72
LCA5-202ENST00000392959 ERCC8Q13216 396 aa10.58□□□□□ -0.72
LCA5-202ENST00000392959 OCIAD2Q56VL3 154 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms