RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ZFAND3Q9H8U3 227 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 SOX21Q9Y651 276 aaPredicted RBP15.58■□□□□ 0.08
PTPN11-202ENST00000392597 AKAP9Q99996 3911 aa15.58■□□□□ 0.08
PTPN11-202ENST00000392597 K7EQM0 130 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 LY6EQ16553 131 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 GOLT1AQ6ZVE7 132 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 TMEM183AQ8IXX5 376 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 AAMDCQ9H7C9 122 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 ZNF253O75346 499 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 IGLV2-11P01706 119 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 PSG9Q00887 426 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 C9orf152Q5JTZ5 239 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 CLEC19AQ6UXS0 136 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 KRTAP1-3Q8IUG1 177 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 MS4A10Q96PG2 267 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 GNB1LQ9BYB4 327 aa15.57■□□□□ 0.08
PTPN11-202ENST00000392597 XKRY2A2RUG3 117 aa15.56■□□□□ 0.08
PTPN11-202ENST00000392597 S100A2P29034 98 aa15.56■□□□□ 0.08
PTPN11-202ENST00000392597 RELQ04864 619 aaPredicted RBP15.56■□□□□ 0.08
PTPN11-202ENST00000392597 WDR73Q6P4I2 378 aa15.56■□□□□ 0.08
PTPN11-202ENST00000392597 SETXQ7Z333 2677 aaKnown RBP15.56■□□□□ 0.08
PTPN11-202ENST00000392597 ZNF469Q96JG9 3925 aaPredicted RBP15.55■□□□□ 0.08
PTPN11-202ENST00000392597 SERTM2A0A1B0GWG4 89 aa15.55■□□□□ 0.08
PTPN11-202ENST00000392597 MT-ND6P03923 174 aa15.55■□□□□ 0.08
PTPN11-202ENST00000392597 CT83Q5H943 113 aa15.55■□□□□ 0.08
PTPN11-202ENST00000392597 GFI1BQ5VTD9 330 aa15.55■□□□□ 0.08
PTPN11-202ENST00000392597 SGK494Q96LW2 274 aa15.55■□□□□ 0.08
PTPN11-202ENST00000392597 IZUMO1RA6ND01 250 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 PRR27Q6MZM9 219 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 PRSS22Q9GZN4 317 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 ZNF580Q9UK33 172 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 ZFP30Q9Y2G7 519 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 CREBBPQ92793 2442 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 C19orf71A6NCJ1 209 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 DIRC3C9JPN6 131 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 TGFAP01135 160 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 TSKUQ8WUA8 353 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 GPR61Q9BZJ8 451 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 GNB4Q9HAV0 340 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 MYO9AB2RTY4 2548 aa15.54■□□□□ 0.08
PTPN11-202ENST00000392597 CELSR1Q9NYQ6 3014 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 CSPG4Q6UVK1 2322 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 TRGV3P03979 118 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 CBLN1P23435 193 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 PPIFP30405 207 aaKnown RBP15.53■□□□□ 0.08
PTPN11-202ENST00000392597 IER3P46695 156 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 C1orf194Q5T5A4 169 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 RASL11AQ6T310 242 aa15.53■□□□□ 0.08
PTPN11-202ENST00000392597 TRAV8-1A0A0A6YYK1 113 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 CSN1S1P47710 185 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 TCL1AP56279 114 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 PSG3Q16557 428 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 USMG5Q96IX5 58 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 MRPL18Q9H0U6 180 aaKnown RBP15.52■□□□□ 0.08
PTPN11-202ENST00000392597 RPP21Q9H633 154 aaKnown RBP15.52■□□□□ 0.08
PTPN11-202ENST00000392597 NAT8BQ9UHF3 227 aa15.52■□□□□ 0.08
PTPN11-202ENST00000392597 A0A087X0K7 114 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 IGHV3-35A0A0C4DH35 117 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 CLPSL1A2RUU4 121 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 RNF223E7ERA6 249 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 BUB3O43684 328 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 CA1P00915 261 aaPredicted RBP15.52■□□□□ 0.07
PTPN11-202ENST00000392597 PRNTQ86SH4 94 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 LINC00527Q9UJ94 153 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 SMAD5-AS1Q9Y6J3 95 aa15.52■□□□□ 0.07
PTPN11-202ENST00000392597 P01737 135 aa15.51■□□□□ 0.07
PTPN11-202ENST00000392597 IGHV4-31P0DP07 118 aa15.51■□□□□ 0.07
PTPN11-202ENST00000392597 WIPF2Q8TF74 440 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-202ENST00000392597 Q96MF0 132 aa15.51■□□□□ 0.07
PTPN11-202ENST00000392597 FBLL1A6NHQ2 334 aaKnown RBP15.5■□□□□ 0.07
PTPN11-202ENST00000392597 A8MWL6 223 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 SNURFLB1AK76 121 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 FSHBP01225 129 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 TPPP2P59282 170 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 OR4B1Q8NGF8 309 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 DAZAP1Q96EP5 407 aaKnown RBP15.5■□□□□ 0.07
PTPN11-202ENST00000392597 METTL26Q96S19 204 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 PSG8Q9UQ74 426 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 NPIPB6E9PJ23 425 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 M0R3E3 92 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 BLCAPP62952 87 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 DEFB112Q30KQ8 113 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 LINC00322Q6ZN03 302 aaPredicted RBP15.5■□□□□ 0.07
PTPN11-202ENST00000392597 TMEM136Q6ZRR5 245 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 WFDC11Q8NEX6 87 aa15.5■□□□□ 0.07
PTPN11-202ENST00000392597 FAM231BA6NCW3 169 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 HLA-DQA1P01909 254 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 PDZD11Q5EBL8 140 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 C9orf139Q6ZV77 190 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 NUP35Q8NFH5 326 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 OR5R1Q8NH85 324 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 HIST1H2BLQ99880 126 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 GFRA4Q9GZZ7 299 aa15.49■□□□□ 0.07
PTPN11-202ENST00000392597 ATP5L2Q7Z4Y8 100 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 GBGT1Q8N5D6 347 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 NOL4LQ96MY1 436 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-202ENST00000392597 NEU1Q99519 415 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 ZNF331Q9NQX6 463 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-202ENST00000392597 U3KQE9 123 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 ITPR3Q14573 2671 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms