RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 OR4F17Q8NGA8 305 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 CSMD1Q96PZ7 3565 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 HES1Q14469 280 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 TRBV6-1A0A0K0K1D8 114 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 CCL25O15444 150 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 TMEM75Q8N9X5 138 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 RAB1BQ9H0U4 201 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 LAMTOR2Q9Y2Q5 125 aa15.35■□□□□ 0.05
SHROOM1-202ENST00000378676 LOC102724200A0A096LPH7 203 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 WI2-2373I1.2A0A1W2PRP0 233 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 NDPQ00604 133 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 C5orf64Q2M2E5 130 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 DYNAPQ8N1N2 210 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 FANCD2OSQ96PS1 177 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 FAM231BA6NCW3 169 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 M0R3E3 92 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 FCGR2BP31994 310 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 Q6ZN92 141 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 ZNF414Q96IQ9 312 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 ATRXP46100 2492 aa15.34■□□□□ 0.05
SHROOM1-202ENST00000378676 LOC105371242A0A075B767 164 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 UBE2V1Q13404 147 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 C11orf71Q6IPW1 123 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 LINC00173Q6ZV60 143 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 TIMD4Q96H15 378 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 TXN2Q99757 166 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 PSG8Q9UQ74 426 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 IGLV11-55A0A075B6I3 123 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 F8W735 103 aaPredicted RBP15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 CHEK1O14757 476 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 CEACAM3P40198 252 aa15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 HNRNPA3P51991 378 aaKnown RBP15.33■□□□□ 0.04
SHROOM1-202ENST00000378676 M0R1W7 72 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 HAX1O00165 279 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 WNK2Q9Y3S1 2297 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 GNG7O60262 68 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 ARMS2P0C7Q2 107 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 PRTN3P24158 256 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 PSG3Q16557 428 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 KLHDC1Q8N7A1 406 aa15.32■□□□□ 0.04
SHROOM1-202ENST00000378676 CRIP1P50238 77 aa15.31■□□□□ 0.04
SHROOM1-202ENST00000378676 IGHV3-23P01764 117 aa15.31■□□□□ 0.04
SHROOM1-202ENST00000378676 ZNF138P52744 262 aa15.31■□□□□ 0.04
SHROOM1-202ENST00000378676 ARPC1AQ92747 370 aa15.31■□□□□ 0.04
SHROOM1-202ENST00000378676 C8orf49Q96NF6 230 aa15.31■□□□□ 0.04
SHROOM1-202ENST00000378676 TRAV9-2A0A087WT02 112 aa15.3■□□□□ 0.04
SHROOM1-202ENST00000378676 CHCHD1Q96BP2 118 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-202ENST00000378676 NPIPB5A8MRT5 1133 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 LYPD1Q8N2G4 141 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 ZNF738Q8NE65 137 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 NDFIP1Q9BT67 221 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 TMEM70Q9BUB7 260 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 RNF24Q9Y225 148 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 MRPS16Q9Y3D3 137 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 COX11Q9Y6N1 276 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 NCOR2Q9Y618 2525 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 IGLL1P15814 213 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 FAM162BQ5T6X4 162 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 VMO1Q7Z5L0 202 aa15.29■□□□□ 0.04
SHROOM1-202ENST00000378676 MFAP4P55083 255 aa15.28■□□□□ 0.04
SHROOM1-202ENST00000378676 A0A1B0GUT8 65 aa15.28■□□□□ 0.04
SHROOM1-202ENST00000378676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 NCBP2LA6PVI3 153 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 K7EQM0 130 aa15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 TSPOP30536 169 aa15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 ZNF562Q6V9R5 426 aa15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 Q8N6K4 173 aa15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 CHD8Q9HCK8 2581 aa15.27■□□□□ 0.04
SHROOM1-202ENST00000378676 TRAV30A0A087WSZ9 112 aa15.27■□□□□ 0.03
SHROOM1-202ENST00000378676 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.03
SHROOM1-202ENST00000378676 TP73-AS1Q9UF72 201 aa15.27■□□□□ 0.03
SHROOM1-202ENST00000378676 TTC9CQ8N5M4 171 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 C21orf62Q9NYP8 219 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 SYS1-DBNDD2H3BUS1 97 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 CSN3P07498 182 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 ZFP36P26651 326 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 KLRB1Q12918 225 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 NEU4Q8WWR8 484 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 C1RLQ9NZP8 487 aa15.26■□□□□ 0.03
SHROOM1-202ENST00000378676 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 CRXO43186 299 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 LEPROTL1O95214 131 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 TMEM190Q8WZ59 177 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 TPPP3Q9BW30 176 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 COL6A6A6NMZ7 2263 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 IGHV2-70DA0A0C4DH43 119 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 A0A1W2PPR1 153 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 OR2T8A6NH00 312 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 GATD1Q8NB37 220 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 TMUB1Q9BVT8 246 aa15.25■□□□□ 0.03
SHROOM1-202ENST00000378676 PPBPP02775 128 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 RIGQ13278 110 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 PDE6HQ13956 83 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 AAMDCQ9H7C9 122 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 MED13LQ71F56 2210 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 IGKV2-40A0A087WW87 121 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 NDUFS7O75251 213 aa15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 IGKV2D-40P01614 121 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-202ENST00000378676 EGR2P11161 476 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms