RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CCDC144NLQ6NUI1 221 aa14.28□□□□□ -0.12
TDP2-202ENST00000378198 S4R3C0 116 aa14.28□□□□□ -0.12
TDP2-202ENST00000378198 NPSP0C0P6 89 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 CT45A10P0DMU9 189 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 PSG9Q00887 426 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 TMEM191AQ9H0A3 160 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 THYN1Q9P016 225 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 ARHGAP32A7KAX9 2087 aa14.27□□□□□ -0.12
TDP2-202ENST00000378198 OOSP1A8MZH6 123 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 CSN1S1P47710 185 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 C11orf71Q6IPW1 123 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 LINC00173Q6ZV60 143 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 MAP1LC3CQ9BXW4 147 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 ST20Q9HBF5 79 aa14.27□□□□□ -0.13
TDP2-202ENST00000378198 M0R3E3 92 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 PET117Q6UWS5 81 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 ARL6IP6Q8N6S5 226 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 IGFBPL1Q8WX77 278 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 C21orf62Q9NYP8 219 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 HSPB8Q9UJY1 196 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 A0A1W2PRD5 423 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 A0A1W2PRF3 423 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 A0A1W2PRM7 423 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 F8W735 103 aaPredicted RBP14.26□□□□□ -0.13
TDP2-202ENST00000378198 C8orf49Q96NF6 230 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 ASCL2Q99929 193 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 TMUB1Q9BVT8 246 aa14.26□□□□□ -0.13
TDP2-202ENST00000378198 RIF1Q5UIP0 2472 aaKnown RBP14.25□□□□□ -0.13
TDP2-202ENST00000378198 ATMQ13315 3056 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 SCGB2A1O75556 95 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 ZNF138P52744 262 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 ADORA2A-AS1P86434 159 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 FBLN7Q53RD9 439 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 BCL6BQ8N143 479 aaPredicted RBP14.25□□□□□ -0.13
TDP2-202ENST00000378198 Q8N6K4 173 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 ABCA1O95477 2261 aa14.25□□□□□ -0.13
TDP2-202ENST00000378198 NCBP2LA6PVI3 153 aaKnown RBP14.24□□□□□ -0.13
TDP2-202ENST00000378198 NDUFB8O95169 186 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 HINT1P49773 126 aaPredicted RBP14.24□□□□□ -0.13
TDP2-202ENST00000378198 EBI3Q14213 229 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 ZNF493Q6ZR52 646 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 MAP1BP46821 2468 aaKnown RBP14.24□□□□□ -0.13
TDP2-202ENST00000378198 RPL7P18124 248 aaKnown RBP14.24□□□□□ -0.13
TDP2-202ENST00000378198 CDSNQ15517 529 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 MINOS1Q5TGZ0 78 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 VMO1Q7Z5L0 202 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 MINOS1-NBL1R4GNA1 71 aa14.24□□□□□ -0.13
TDP2-202ENST00000378198 FBLL1A6NHQ2 334 aaKnown RBP14.23□□□□□ -0.13
TDP2-202ENST00000378198 CSN3P07498 182 aa14.23□□□□□ -0.13
TDP2-202ENST00000378198 AP5S1Q9NUS5 200 aa14.23□□□□□ -0.13
TDP2-202ENST00000378198 TMEM189A5PLL7 270 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 HSBP1L1C9JCN9 74 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 NDPQ00604 133 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 KLRB1Q12918 225 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 SAPCD1Q5SSQ6 148 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 COX8CQ7Z4L0 72 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 DYNAPQ8N1N2 210 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 ORAOV1Q8WV07 137 aa14.22□□□□□ -0.13
TDP2-202ENST00000378198 ZFHX2Q9C0A1 2572 aaPredicted RBP14.22□□□□□ -0.13
TDP2-202ENST00000378198 S100A7P31151 101 aa14.21□□□□□ -0.13
TDP2-202ENST00000378198 PRSS3P2Q8NHM4 247 aa14.21□□□□□ -0.13
TDP2-202ENST00000378198 TPPP3Q9BW30 176 aa14.21□□□□□ -0.13
TDP2-202ENST00000378198 PRB4P10163 310 aaPredicted RBP14.21□□□□□ -0.14
TDP2-202ENST00000378198 TMEM11P17152 192 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 UCNP55089 124 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 LYZL1Q6UWQ5 148 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 FA2HQ7L5A8 372 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 ADGRG4Q8IZF6 3080 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 RABAC1Q9UI14 185 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 MSRB2Q9Y3D2 182 aa14.21□□□□□ -0.14
TDP2-202ENST00000378198 hDV102S1A0JD36 115 aa14.2□□□□□ -0.14
TDP2-202ENST00000378198 SH2D1AO60880 128 aa14.2□□□□□ -0.14
TDP2-202ENST00000378198 MS4A6AQ9H2W1 248 aa14.2□□□□□ -0.14
TDP2-202ENST00000378198 KALRNO60229 2985 aa14.2□□□□□ -0.14
TDP2-202ENST00000378198 OR2T8A6NH00 312 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 CTSGP08311 255 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 DMXL2Q8TDJ6 3036 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 PIEZO2Q9H5I5 2752 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 RELQ04864 619 aaPredicted RBP14.19□□□□□ -0.14
TDP2-202ENST00000378198 LINC01545Q5VT33 79 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 OR10AG1Q8NH19 301 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 PRR25Q96S07 402 aa14.19□□□□□ -0.14
TDP2-202ENST00000378198 ZZEF1O43149 2961 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 IGHV7-81A0A0B4J1V7 117 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 EGR2P11161 476 aaPredicted RBP14.18□□□□□ -0.14
TDP2-202ENST00000378198 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
TDP2-202ENST00000378198 SLC25A34Q6PIV7 304 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 DTX2Q86UW9 622 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 ZNF747Q9BV97 191 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 U3KQK5 164 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 IGKV2-40A0A087WW87 121 aaPredicted RBP14.18□□□□□ -0.14
TDP2-202ENST00000378198 IGKV2D-40P01614 121 aaPredicted RBP14.18□□□□□ -0.14
TDP2-202ENST00000378198 FAM104BQ5XKR9 115 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
TDP2-202ENST00000378198 BMI1P35226 326 aa14.17□□□□□ -0.14
TDP2-202ENST00000378198 ZNF738Q8NE65 137 aa14.17□□□□□ -0.14
TDP2-202ENST00000378198 SIRPDQ9H106 197 aa14.17□□□□□ -0.14
TDP2-202ENST00000378198 SCRT2Q9NQ03 307 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms