RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
VPS13A-204ENST00000376634 FXYD7P58549 80 aa10.28□□□□□ -0.76
VPS13A-204ENST00000376634 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
VPS13A-204ENST00000376634 ATRAIDQ6UW56 229 aa10.27□□□□□ -0.76
VPS13A-204ENST00000376634 RPRMLQ8N4K4 120 aa10.27□□□□□ -0.76
VPS13A-204ENST00000376634 MLNRO43193 412 aa10.27□□□□□ -0.76
VPS13A-204ENST00000376634 IGFBP3P17936 291 aaPredicted RBP10.27□□□□□ -0.76
VPS13A-204ENST00000376634 EIF4EBP2Q13542 120 aaPredicted RBP10.27□□□□□ -0.76
VPS13A-204ENST00000376634 MINOS1Q5TGZ0 78 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 HIST3H2BBQ8N257 126 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 MINOS1-NBL1R4GNA1 71 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 FCN3O75636 299 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 WBP1Q96G27 269 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
VPS13A-204ENST00000376634 TRACP01848 142 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 PRIMA1Q86XR5 153 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 LINC00477Q96M19 166 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 E9PLN8 166 aa10.27□□□□□ -0.77
VPS13A-204ENST00000376634 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 C9JAW5 83 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 ZNF561-AS1K7EIQ3 104 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 DMRTC2Q8IXT2 367 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-204ENST00000376634 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-204ENST00000376634 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-204ENST00000376634 SPRR3Q9UBC9 169 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 AMBPP02760 352 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 PSG1P11464 419 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 NEUROG3Q9Y4Z2 214 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 SOCS3O14543 225 aa10.26□□□□□ -0.77
VPS13A-204ENST00000376634 NDPQ00604 133 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 SH2D1AO60880 128 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
VPS13A-204ENST00000376634 ZNF319Q9P2F9 582 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 IGKV1D-43A0A0B4J1Z2 117 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 DSCR8Q96T75 97 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 PSG3Q16557 428 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 IFITM1P13164 125 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 LY6DQ14210 128 aa10.25□□□□□ -0.77
VPS13A-204ENST00000376634 hADV29S1A0JD25 119 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 TCRAP04437 139 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 SRSF3P84103 164 aaKnown RBP10.24□□□□□ -0.77
VPS13A-204ENST00000376634 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 SPACA3Q8IXA5 215 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 IGHV1-18A0A0C4DH31 117 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 RNF126Q9BV68 326 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 B4DSR2 109 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 IGHV1-8P0DP01 117 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 A0A1B0GTI1 187 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 PRB4P10163 310 aaPredicted RBP10.24□□□□□ -0.77
VPS13A-204ENST00000376634 SELENOKQ9Y6D0 94 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 C9orf139Q6ZV77 190 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 ZCCHC24Q8N2G6 241 aaKnown RBP10.24□□□□□ -0.77
VPS13A-204ENST00000376634 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 M0R1W7 72 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
VPS13A-204ENST00000376634 F8VVB4 439 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 F8VWA3 439 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 IGHV1-46P01743 117 aa10.24□□□□□ -0.77
VPS13A-204ENST00000376634 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 Q8TAT8 98 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 DEFB130BP0DP73 79 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 DEFB130AP0DP74 79 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 C1orf194Q5T5A4 169 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 A0A087WWL8 130 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 EGR2P11161 476 aaPredicted RBP10.23□□□□□ -0.77
VPS13A-204ENST00000376634 C5orf64Q2M2E5 130 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 NABP1Q96AH0 204 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 SPXQ9BT56 116 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 COL4A1P02462 1669 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 OOSP1A8MZH6 123 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 TMEM258P61165 79 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 DEFB104AQ8WTQ1 72 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
VPS13A-204ENST00000376634 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 NEGR1Q7Z3B1 354 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 PTPRSQ13332 1948 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 TFF1P04155 84 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 CGB3P0DN86 165 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 UBL5Q9BZL1 73 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 DAZ1Q9NQZ3 744 aaKnown RBP10.22□□□□□ -0.77
VPS13A-204ENST00000376634 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
VPS13A-204ENST00000376634 EFNA4P52798 201 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms