RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 HINT1P49773 126 aaPredicted RBP14.37□□□□□ -0.11
PTPDC1-202ENST00000375360 GFI1BQ5VTD9 330 aa14.37□□□□□ -0.11
PTPDC1-202ENST00000375360 STHQ8IWL8 128 aa14.37□□□□□ -0.11
PTPDC1-202ENST00000375360 TSKUQ8WUA8 353 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 IGHV2-5P01817 119 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 HOXA5P20719 270 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 PMCHL1Q16048 86 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 OR4C5Q8NGB2 326 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 TRAV21A0A0B4J279 112 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 Q6AWC8 147 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 HTN3P15516 51 aa14.36□□□□□ -0.11
PTPDC1-202ENST00000375360 A0A1B0GW64 132 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 SNAI2O43623 268 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 TOMM40O96008 361 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 TMEM170AQ8WVE7 144 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 TMEM160Q9NX00 188 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 SAP30O75446 220 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 FNDC4Q9H6D8 234 aaPredicted RBP14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 PRRC2AP48634 2157 aaKnown RBP14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 TRBV24-1A0A075B6N3 115 aa14.35□□□□□ -0.11
PTPDC1-202ENST00000375360 IGHV4-30-2A0A087WSY4 118 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 PRSS2P07478 247 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 TMEM70Q9BUB7 260 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 TRGV2A0A075B6R0 118 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 UBE2L6O14933 153 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 EVI2AP22794 236 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 FXYD7P58549 80 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 USMG5Q96IX5 58 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 C14orf144Q96I85 54 aa14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 PEF1Q9UBV8 284 aaKnown RBP14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 TNRC6AQ8NDV7 1962 aaKnown RBP14.34□□□□□ -0.11
PTPDC1-202ENST00000375360 IGHV4-39P01824 125 aa14.33□□□□□ -0.11
PTPDC1-202ENST00000375360 ST6GALNAC6Q969X2 333 aa14.33□□□□□ -0.11
PTPDC1-202ENST00000375360 SHANK2-AS3Q9BTD1 123 aa14.33□□□□□ -0.11
PTPDC1-202ENST00000375360 FNDC10F2Z333 226 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 RNF182Q8N6D2 247 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 PARD6GQ9BYG4 376 aaPredicted RBP14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 GATA3P23771 443 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 ZNF414Q96IQ9 312 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 FBLL1A6NHQ2 334 aaKnown RBP14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 ERCC8Q13216 396 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 RITA1Q96K30 269 aa14.33□□□□□ -0.12
PTPDC1-202ENST00000375360 PSMB2P49721 201 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 FAM110DQ8TAY7 271 aaPredicted RBP14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 NRN1Q9NPD7 142 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 TRAV9-1A0A075B6T8 112 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 NCR2O95944 276 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 DDTP30046 118 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 ZNF138P52744 262 aa14.32□□□□□ -0.12
PTPDC1-202ENST00000375360 PRUNE2Q8WUY3 3088 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 TRAV8-6A0A0B4J262 113 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 TRAV12-3A0A0B4J271 114 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 OVOL1O14753 267 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 ACTL10Q5JWF8 245 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 TMEM242Q9NWH2 141 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 PAX1P15863 534 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 SRSF8Q9BRL6 282 aaKnown RBP14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 SSBP2P81877 361 aaPredicted RBP14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 POU2AF1Q16633 256 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 ASPHD1Q5U4P2 390 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 DUSP14O95147 198 aaKnown RBP14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 C19orf54Q5BKX5 351 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 LYZL1Q6UWQ5 148 aa14.31□□□□□ -0.12
PTPDC1-202ENST00000375360 LOC105371267A0A1B0GV96 52 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 TMEM262E9PQX1 116 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 VPS25Q9BRG1 176 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 DAZ1Q9NQZ3 744 aaKnown RBP14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 GUSBP1Q15486 140 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 TMEM170BQ5T4T1 132 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 FOXL1Q12952 345 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 SAMD13Q5VXD3 122 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 SLC25A34Q6PIV7 304 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 C1orf122Q6ZSJ8 110 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 C9orf139Q6ZV77 190 aa14.3□□□□□ -0.12
PTPDC1-202ENST00000375360 CRXO43186 299 aaPredicted RBP14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 GCSHP23434 173 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 GGTLC3B5MD39 225 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 SCGB3A1Q96QR1 104 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 UQCR10Q9UDW1 63 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 IGLC7A0M8Q6 106 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 FAM223BA6NKX1 122 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 H7C2G1 150 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 IGHV4-59P01825 116 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 IGLC1P0CG04 106 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 PSG3Q16557 428 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 FAM223AQ8IWN6 122 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 NUP35Q8NFH5 326 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 FOXC2Q99958 501 aa14.29□□□□□ -0.12
PTPDC1-202ENST00000375360 JKAMPQ9P055 326 aa14.28□□□□□ -0.12
PTPDC1-202ENST00000375360 TMEM256Q8N2U0 113 aa14.28□□□□□ -0.12
PTPDC1-202ENST00000375360 GNB1LQ9BYB4 327 aa14.28□□□□□ -0.12
PTPDC1-202ENST00000375360 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
PTPDC1-202ENST00000375360 A0A1B0GW15 77 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 LINC00614P0C842 121 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 DEFB112Q30KQ8 113 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 FAM209BQ5JX69 171 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 UTF1Q5T230 341 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 RAB37Q96AX2 223 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms