RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 MPC1Q9Y5U8 109 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TENM3Q9P273 2699 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 WNK1Q9H4A3 2382 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IGLV3-12A0A075B6K2 115 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IGHV3-74A0A0B4J1X5 117 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TMEM72A0PK05 275 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 H0YJW9 148 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 H7BYZ3 331 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 J3QQQ9 107 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 M0R1X1 148 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 M0R381 172 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SAP18O00422 153 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 AMBPP02760 352 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 HLA-DPB1P04440 258 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IMPA1P29218 277 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 POLR2IP36954 125 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SLC38A11Q08AI6 406 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RRN3P1Q2M238 152 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RSPO1Q2MKA7 263 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 VMA21Q3ZAQ7 101 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 LDLRAD2Q5SZI1 272 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 BCL2L15Q5TBC7 163 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 Q5XG85 94 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 GLIPR1L1Q6UWM5 242 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 HRCT1Q6UXD1 115 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 GTF2H5Q6ZYL4 71 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FAM19A3Q7Z5A8 133 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TMEM75Q8N9X5 138 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 LINC01555Q8NAE3 123 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF555Q8NEP9 628 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF519Q8TB69 540 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 LYZL4Q96KX0 146 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 OR4C12Q96R67 309 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TRIB3Q96RU7 358 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SNHG12Q9BXW3 62 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TAS2R8Q9NYW2 309 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CKLFQ9UBR5 152 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 MOB4Q9Y3A3 225 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FAM215AQ9Y5M1 114 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 HRNRQ86YZ3 2850 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 TRBV20OR9-2A0A075B6H5 130 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LY6LH3BQJ8 138 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 NPFFO15130 113 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 CHTF8P0CG12 524 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF728P0DKX0 622 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 IL3RAP26951 378 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 MPGP29372 298 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 BTCP35070 178 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 TGFBR1P36897 503 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF83P51522 516 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 GABARAPL2P60520 117 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 GTF3C1Q12789 2109 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 MRPL2Q5T653 305 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 C9orf66Q5T8R8 295 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 C22orf39Q6P5X5 142 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 Q6ZRP5 223 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LINC00173Q6ZV60 143 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 KTN1-AS1Q86SY8 53 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 WDR86Q86TI4 376 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 C4orf33Q8N1A6 199 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 C11orf42Q8N5U0 333 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 ZFP62Q8NB50 900 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SUMF2Q8NBJ7 301 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF721Q8TF20 911 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LCN9Q8WX39 176 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SLC25A46Q96AG3 418 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 RMI2Q96E14 147 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 BORCS8Q96FH0 119 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 GPX7Q96SL4 187 aaPredicted RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 MRPL57Q9BQC6 102 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 Q9H3A6 140 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 Q9H521 79 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 CACNG5Q9UF02 275 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 CYSLTR1Q9Y271 337 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 HSPE1-MOB4S4R3N1 261 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 IGHV1-45A0A0A0MS14 117 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LST1O00453 97 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 TNFSF13O75888 250 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LYZL6O75951 148 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SOD1P00441 154 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 KRASP01116 189 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LTAP01374 205 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 IGLV3-25P01717 112 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SRP19P09132 144 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 MT3P25713 68 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 RPL22P35268 128 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 QRFPP83859 136 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 PLGLB1Q02325 96 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 RBMY1FQ15415 496 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 NCMAPQ5T1S8 102 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 RPL22L1Q6P5R6 122 aaKnown RBP1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SLC25A34Q6PIV7 304 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 AMTNQ6UX39 209 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 TMEM14EPQ6UXP3 125 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 LCA10Q71F78 164 aa1.67□□□□□ -2.14
CCDC7-204ENST00000375025 SSX8Q7RTT4 187 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms