RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
PTPRK-203ENST00000368207 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
PTPRK-203ENST00000368207 BEX4Q9NWD9 120 aaPredicted RBP9.89□□□□□ -0.83
PTPRK-203ENST00000368207 FCN3O75636 299 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 JMJD8Q96S16 334 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 PPP1R17O96001 155 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 HTN3P15516 51 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 IL15RAQ13261 267 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 KRTAP27-1Q3LI81 207 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 GSN-AS1Q9NRJ2 163 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 KAAG1Q9UBP8 84 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 COL4A4P53420 1690 aaPredicted RBP9.88□□□□□ -0.83
PTPRK-203ENST00000368207 TMEM262E9PQX1 116 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 TCF21O43680 179 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 NCR2O95944 276 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 LINC00614P0C842 121 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 HIST1H2BLQ99880 126 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 KIAA1549LQ6ZVL6 1849 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 ATP5LO75964 103 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 LEPP41159 167 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 PAPPA-AS1Q5QFB9 102 aa9.88□□□□□ -0.83
PTPRK-203ENST00000368207 ZNF138P52744 262 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
PTPRK-203ENST00000368207 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 HIVEP3Q5T1R4 2406 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 LYZL1Q6UWQ5 148 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 Q6ZSR3 168 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 USMG5Q96IX5 58 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 SHANK2-AS3Q9BTD1 123 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 LCNL1Q6ZST4 164 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 C9orf139Q6ZV77 190 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
PTPRK-203ENST00000368207 NIT1Q86X76 327 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
PTPRK-203ENST00000368207 TMEM131Q92545 1883 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 A6NJY4 79 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 TMEM256Q8N2U0 113 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 KLHL30-AS1Q8NEE0 82 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 JKAMPQ9P055 326 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-203ENST00000368207 SAP30O75446 220 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 PRB1P04280 392 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 NUP35Q8NFH5 326 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 HIVEP2P31629 2446 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 ANKRD11Q6UB99 2663 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-203ENST00000368207 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
PTPRK-203ENST00000368207 UBE2CO00762 179 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 PSG3Q16557 428 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 MED12LQ86YW9 2145 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 Q96MF0 132 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 PEF1Q9UBV8 284 aaKnown RBP9.85□□□□□ -0.83
PTPRK-203ENST00000368207 TNCP24821 2201 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 SH2D1AO60880 128 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 LHBP01229 141 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 AMBPP02760 352 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 FXYD7P58549 80 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 ERCC8Q13216 396 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 MSMPQ1L6U9 139 aa9.85□□□□□ -0.83
PTPRK-203ENST00000368207 FAM110DQ8TAY7 271 aaPredicted RBP9.85□□□□□ -0.83
PTPRK-203ENST00000368207 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 F2Z2F3 143 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 NDUFA3O95167 84 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 ATP5L2Q7Z4Y8 100 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 ST20Q9HBF5 79 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 IGHV2-70P01814 119 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 FAM223BA6NKX1 122 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 HBDP02042 147 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 FAM223AQ8IWN6 122 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 RNF182Q8N6D2 247 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 SPTBN4Q9H254 2564 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 D6R8Y8 96 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 PPBPP02775 128 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 ACTL10Q5JWF8 245 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 LY96Q9Y6Y9 160 aa9.84□□□□□ -0.83
PTPRK-203ENST00000368207 LINC00587B1AMM8 73 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 Q86TA4 180 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 DAZ1Q9NQZ3 744 aaKnown RBP9.83□□□□□ -0.84
PTPRK-203ENST00000368207 EML6Q6ZMW3 1958 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 CACNG7P62955 275 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 GGTLC3B5MD39 225 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 FABP2P12104 132 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 GATA3P23771 443 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 ADORA2A-AS1P86434 159 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 Q8NA96 180 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 NXT2Q9NPJ8 142 aaKnown RBP9.83□□□□□ -0.84
PTPRK-203ENST00000368207 PCNTO95613 3336 aa9.83□□□□□ -0.84
PTPRK-203ENST00000368207 FNDC4Q9H6D8 234 aaPredicted RBP9.82□□□□□ -0.84
PTPRK-203ENST00000368207 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
PTPRK-203ENST00000368207 A0A1B0GV90 55 aa9.82□□□□□ -0.84
PTPRK-203ENST00000368207 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms