RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LINC00614P0C842 121 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 GAGE1Q13065 139 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 PSG3Q16557 428 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 C5orf64Q2M2E5 130 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 LYPD1Q8N2G4 141 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 NPBQ8NG41 125 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 HRNRQ86YZ3 2850 aaPredicted RBP6.76□□□□□ -1.33
RFX3-202ENST00000358730 LOC105371242A0A075B767 164 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 ZNF138P52744 262 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 CDSNQ15517 529 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 BCL6BQ8N143 479 aaPredicted RBP6.76□□□□□ -1.33
RFX3-202ENST00000358730 TMEM190Q8WZ59 177 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 ARPC1AQ92747 370 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 ZNF414Q96IQ9 312 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 IGF2RP11717 2491 aa6.76□□□□□ -1.33
RFX3-202ENST00000358730 WI2-2373I1.2A0A1W2PRP0 233 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 ODF3BA8MYP8 253 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 M0R1W7 72 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 CSN3P07498 182 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 CT45A10P0DMU9 189 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 RIGQ13278 110 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 TRAV30A0A087WSZ9 112 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 NCBP2LA6PVI3 153 aaKnown RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 CRXO43186 299 aaPredicted RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 FOSL1P15407 271 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 MFAP4P55083 255 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 NDPQ00604 133 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 CYB5R2Q6BCY4 276 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 S100A7AQ86SG5 101 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 MRPS16Q9Y3D3 137 aaKnown RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
RFX3-202ENST00000358730 NPIPB5A8MRT5 1133 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 OVOL3O00110 214 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 IGHV3-23P01764 117 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 PRTN3P24158 256 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
RFX3-202ENST00000358730 ATRXP46100 2492 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 H0Y8G0 127 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 CRIP1P50238 77 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 PDE6HQ13956 83 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
RFX3-202ENST00000358730 CSN1S1P47710 185 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 Q6AWC8 147 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 ZNF562Q6V9R5 426 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 TMUB1Q9BVT8 246 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 C1RLQ9NZP8 487 aa6.74□□□□□ -1.33
RFX3-202ENST00000358730 TMSB15BA0A087X1C1 80 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 hDV102S1A0JD36 115 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 NDUFB8O95169 186 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 OR5AL1P0C617 328 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 ADORA2A-AS1P86434 159 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 CCDC144NLQ6NUI1 221 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 VMO1Q7Z5L0 202 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 DYNAPQ8N1N2 210 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 ZNF48Q96MX3 618 aaPredicted RBP6.73□□□□□ -1.33
RFX3-202ENST00000358730 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
RFX3-202ENST00000358730 A0A1B0GW15 77 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 OR2T8A6NH00 312 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
RFX3-202ENST00000358730 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
RFX3-202ENST00000358730 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 AP5S1Q9NUS5 200 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 MED13LQ71F56 2210 aa6.73□□□□□ -1.33
RFX3-202ENST00000358730 SPTBN1Q01082 2364 aaKnown RBP6.73□□□□□ -1.33
RFX3-202ENST00000358730 C11orf71Q6IPW1 123 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 TTC9CQ8N5M4 171 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 THYN1Q9P016 225 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 COL6A6A6NMZ7 2263 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 SH2D1AO60880 128 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 GATD1Q8NB37 220 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 NEU4Q8WWR8 484 aaPredicted RBP6.72□□□□□ -1.33
RFX3-202ENST00000358730 SERTM2A0A1B0GWG4 89 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 SCGB2A1O75556 95 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 TMEM11P17152 192 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
RFX3-202ENST00000358730 PSG9Q00887 426 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 UNQ5815/PRO19632Q6UWF5 114 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 FA2HQ7L5A8 372 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
RFX3-202ENST00000358730 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 LYZL1Q6UWQ5 148 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 PET117Q6UWS5 81 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 Q8N6K4 173 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 Q8TAT8 98 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
RFX3-202ENST00000358730 IGHV3OR16-8A0A075B7F1 116 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms