RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 FSTP19883 344 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 PCP4P48539 62 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 PUSL1Q8N0Z8 303 aaKnown RBP4.7□□□□□ -1.66
BRCA1-203ENST00000357654 OR11H6Q8NGC7 330 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 C5orf66Q9H5L9 145 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 FOXI1Q12951 378 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 DEFB113Q30KQ7 82 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 WFDC6Q9BQY6 131 aa4.7□□□□□ -1.66
BRCA1-203ENST00000357654 IGHV4-30-2A0A087WSY4 118 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 SPATA31B1PQ5VZV4 182 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 Q6Q795 121 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ZNF883P0CG24 379 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 COX7B2Q8TF08 81 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ZNRD1Q9P1U0 126 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 A0A1B0GX51 115 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ETV2O00321 342 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ZNF660Q6AZW8 331 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-203ENST00000357654 IGFBPL1Q8WX77 278 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 U3KQE9 123 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 M0R1W7 72 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 NGFRP08138 427 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ELANEP08246 267 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 MP68P56378 58 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 DEFB112Q30KQ8 113 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 SLC25A48Q6ZT89 311 aaKnown RBP4.69□□□□□ -1.66
BRCA1-203ENST00000357654 BCL6BQ8N143 479 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ANKRD29Q8N6D5 301 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 LAMB2P55268 1798 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 IGLV1-36A0A0B4J1U3 117 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 TRAV4A0A0B4J268 109 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ARMS2P0C7Q2 107 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 ARTNQ5T4W7 220 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 LINC00479Q96M42 142 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 PRR25Q96S07 402 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 HIGD2AQ9BW72 106 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 NEUROG3Q9Y4Z2 214 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 E7EQL1 145 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 LINC01551Q86U37 167 aa4.69□□□□□ -1.66
BRCA1-203ENST00000357654 IGHV1OR15-1A0A075B7D0 117 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 IGKV1-8A0A0C4DH67 115 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 GATA3P23771 443 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 KIR2DL5BQ8NHK3 375 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 SIGLEC8Q9NYZ4 499 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 BCORQ6W2J9 1755 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 DDTP30046 118 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 KIAA0040Q15053 153 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 EP400Q96L91 3159 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 YPEL1O60688 119 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 HIGD2BQ4VC39 106 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 NHLRC3Q5JS37 347 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 YPEL2Q96QA6 119 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 RETNLBQ9BQ08 111 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 SMDT1Q9H4I9 107 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 CDK5RAP2Q96SN8 1893 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 CCDC88CQ9P219 2028 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 CXCL2P19875 107 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 UBE2D2P62837 147 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 AMTNQ6UX39 209 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 IGKV1D-43A0A0B4J1Z2 117 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 PFN1P07737 140 aaKnown RBP4.68□□□□□ -1.66
BRCA1-203ENST00000357654 ZNF362Q5T0B9 420 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-203ENST00000357654 MSRB3Q8IXL7 192 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 C11orf45Q8TAV5 145 aa4.68□□□□□ -1.66
BRCA1-203ENST00000357654 A0A1W2PR77 199 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 C1QCP02747 245 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 SRSF2Q01130 221 aaKnown RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 ZFP36L1Q07352 338 aaKnown RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 CD300LDQ6UXZ3 194 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 LYZL4Q96KX0 146 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 RGPD3A6NKT7 1758 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 RGPD4Q7Z3J3 1758 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 PPBPP02775 128 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 ATP5G1P05496 136 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 RHOHQ15669 191 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 NRXN2Q9P2S2 1712 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 TRAV3A0A0B4J244 114 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 ATP5IP56385 69 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 MRPL23Q16540 153 aaKnown RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 UTF1Q5T230 341 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 FAM104BQ5XKR9 115 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 VSIG2Q96IQ7 327 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 RFNGQ9Y644 331 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 ARAP2Q8WZ64 1704 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 LY6G6EA0A0G2JKS1 128 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 A0A1B0GWJ7 208 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 MST1P26927 711 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 GGACTQ9BVM4 153 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 PLSCR4Q9NRQ2 329 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 TPRP12270 2363 aaKnown RBP4.67□□□□□ -1.66
BRCA1-203ENST00000357654 USP17L23D6RBM5 183 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 LTAP01374 205 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 IGKV1-17P01599 117 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 GUSBP1Q15486 140 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 TEX36Q5VZQ5 186 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 AMN1Q8IY45 258 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 A0A087X0K7 114 aa4.67□□□□□ -1.66
BRCA1-203ENST00000357654 TCRBV5S1A1TA0A578 114 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms