RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 UQCR10Q9UDW1 63 aa18.58■□□□□ 0.57
USP25-203ENST00000351097 WNK2Q9Y3S1 2297 aa18.58■□□□□ 0.57
USP25-203ENST00000351097 H3BRN7 92 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 COL8A1P27658 744 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 PMCHL1Q16048 86 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 PRNTQ86SH4 94 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 CIARTQ8N365 385 aaPredicted RBP18.58■□□□□ 0.56
USP25-203ENST00000351097 Q8N6K4 173 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 AJUBAQ96IF1 538 aa18.58■□□□□ 0.56
USP25-203ENST00000351097 TRBV19A0A075B6N1 114 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 EBI3Q14213 229 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 C5orf64Q2M2E5 130 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 OR4F17Q8NGA8 305 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 IGHV4-61A0A0C4DH41 118 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 IGLC2P0DOY2 106 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 IGLC3P0DOY3 106 aa18.57■□□□□ 0.56
USP25-203ENST00000351097 ATP5J2P56134 94 aa18.56■□□□□ 0.56
USP25-203ENST00000351097 SRSF1Q07955 248 aaKnown RBP eCLIP18.56■□□□□ 0.56
USP25-203ENST00000351097 LCN12Q6JVE5 192 aa18.56■□□□□ 0.56
USP25-203ENST00000351097 EBLN2Q6P2I7 272 aa18.56■□□□□ 0.56
USP25-203ENST00000351097 KLHDC1Q8N7A1 406 aa18.56■□□□□ 0.56
USP25-203ENST00000351097 BTF3P20290 206 aaKnown RBP18.55■□□□□ 0.56
USP25-203ENST00000351097 C16orf54Q6UWD8 224 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 URB1-AS1Q96HZ7 61 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 NDUFS8O00217 210 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 G0S2P27469 103 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 PRR31Q5SQ13 230 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 ZNF491Q8N8L2 437 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 RNF125Q96EQ8 232 aa18.55■□□□□ 0.56
USP25-203ENST00000351097 SAA4P35542 130 aa18.54■□□□□ 0.56
USP25-203ENST00000351097 LYPD1Q8N2G4 141 aa18.54■□□□□ 0.56
USP25-203ENST00000351097 TMEM75Q8N9X5 138 aa18.54■□□□□ 0.56
USP25-203ENST00000351097 HLA-DRB1P01911 266 aa18.54■□□□□ 0.56
USP25-203ENST00000351097 FOXA3P55318 350 aaPredicted RBP18.54■□□□□ 0.56
USP25-203ENST00000351097 CLEC2AQ6UVW9 174 aa18.54■□□□□ 0.56
USP25-203ENST00000351097 C2orf70A6NJV1 201 aa18.53■□□□□ 0.56
USP25-203ENST00000351097 BATFQ16520 125 aa18.53■□□□□ 0.56
USP25-203ENST00000351097 SIGLEC15Q6ZMC9 328 aa18.53■□□□□ 0.56
USP25-203ENST00000351097 ATOH7Q8N100 152 aa18.53■□□□□ 0.56
USP25-203ENST00000351097 C17orf77Q96MU5 243 aa18.53■□□□□ 0.56
USP25-203ENST00000351097 NCBP2LA6PVI3 153 aaKnown RBP18.52■□□□□ 0.56
USP25-203ENST00000351097 HAX1O00165 279 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 CHEK1O14757 476 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 IL4P05112 153 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 ZNF25P17030 456 aaPredicted RBP18.52■□□□□ 0.56
USP25-203ENST00000351097 CHCHD1Q96BP2 118 aaKnown RBP18.52■□□□□ 0.56
USP25-203ENST00000351097 TXN2Q99757 166 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 ZFP30Q9Y2G7 519 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 CSMD1Q96PZ7 3565 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 EPG5Q9HCE0 2579 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 IGHV4-30-2A0A087WSY4 118 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 K7EQM0 130 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 TMEM11P17152 192 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 PAX8Q06710 450 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 PIP4P2Q8N4L2 257 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 NRGNQ92686 78 aa18.52■□□□□ 0.56
USP25-203ENST00000351097 UTP20O75691 2785 aaKnown RBP18.52■□□□□ 0.55
USP25-203ENST00000351097 LOC102724200A0A096LPH7 203 aaPredicted RBP18.51■□□□□ 0.55
USP25-203ENST00000351097 WI2-2373I1.2A0A1W2PRP0 233 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 APOHP02749 345 aaPredicted RBP18.51■□□□□ 0.55
USP25-203ENST00000351097 Q56UQ5 140 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 FAM120AOSQ5T036 256 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 ZNF562Q6V9R5 426 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 Q6ZN92 141 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 Q71RC1 249 aaPredicted RBP18.51■□□□□ 0.55
USP25-203ENST00000351097 CENPVL3A0A0U1RRI6 287 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 MRPS12O15235 138 aaKnown RBP18.51■□□□□ 0.55
USP25-203ENST00000351097 ZC2HC1AQ96GY0 325 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 NDFIP1Q9BT67 221 aa18.51■□□□□ 0.55
USP25-203ENST00000351097 UBR5O95071 2799 aaPredicted RBP18.5■□□□□ 0.55
USP25-203ENST00000351097 TRAV30A0A087WSZ9 112 aa18.5■□□□□ 0.55
USP25-203ENST00000351097 ZNF785A8K8V0 405 aa18.5■□□□□ 0.55
USP25-203ENST00000351097 NPFFO15130 113 aa18.5■□□□□ 0.55
USP25-203ENST00000351097 KLF17Q5JT82 389 aaPredicted RBP18.5■□□□□ 0.55
USP25-203ENST00000351097 S100A7AQ86SG5 101 aa18.5■□□□□ 0.55
USP25-203ENST00000351097 ABCA2Q9BZC7 2435 aa18.5■□□□□ 0.55
USP25-203ENST00000351097 FAM106CPP0CH98 169 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 FCGR2BP31994 310 aaPredicted RBP18.49■□□□□ 0.55
USP25-203ENST00000351097 HNRNPA3P51991 378 aaKnown RBP18.49■□□□□ 0.55
USP25-203ENST00000351097 NDPQ00604 133 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 PSG8Q9UQ74 426 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 TRAV9-2A0A087WT02 112 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 C20orf202A1L168 122 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 NPIPB5A8MRT5 1133 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 M0QZ24 198 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 GNG7O60262 68 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 ZNF124Q15973 351 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 PSG3Q16557 428 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 MAJINQ3KP22 176 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 COL5A1-AS1Q5SY13 56 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 ZNF414Q96IQ9 312 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 CLEC5AQ9NY25 188 aa18.49■□□□□ 0.55
USP25-203ENST00000351097 IGLV11-55A0A075B6I3 123 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 ARPC1AQ92747 370 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 TMEM70Q9BUB7 260 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 SPG11Q96JI7 2443 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 MFAP4P55083 255 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 ZNF48Q96MX3 618 aaPredicted RBP18.48■□□□□ 0.55
USP25-203ENST00000351097 FANCD2OSQ96PS1 177 aa18.48■□□□□ 0.55
USP25-203ENST00000351097 IGHV1-24A0A0C4DH33 117 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms