RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MBD3L4A6NDZ8 208 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 MBD3L3A6NE82 208 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 FBLL1A6NHQ2 334 aaKnown RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 MBD3L5A6NJ08 208 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 TEX22C9J3V5 150 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 AZU1P20160 251 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 DLX6P56179 175 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 SRSF1Q07955 248 aaKnown RBP eCLIP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 SEM1Q6ZVN7 128 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 BCL6BQ8N143 479 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 MBD3L2Q8NHZ7 208 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 SPATA25Q9BR10 227 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
HOXA1-201ENST00000343060 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 CADP27708 2225 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 ARFGEF3Q5TH69 2177 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 C19orf67A6NJJ6 358 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 E9PLD3 99 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 I3L2K1 104 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 GNG7O60262 68 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 NPYP01303 97 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 IGKV1-17P01599 117 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 ODF1Q14990 250 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 CHAC1Q9BUX1 264 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 HHLA3Q9XRX5 114 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 COL6A3P12111 3177 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 VPS13AQ96RL7 3174 aa7.62□□□□□ -1.19
HOXA1-201ENST00000343060 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 SERTM2A0A1B0GWG4 89 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 EVI2AP22794 236 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
HOXA1-201ENST00000343060 CD300EQ496F6 205 aaPredicted RBP7.61□□□□□ -1.19
HOXA1-201ENST00000343060 TMEM133Q9H2Q1 129 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 PLXNB1O43157 2135 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 IGHV3-21A0A0B4J1V1 117 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 F8W1H4 67 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 CEACAM4O75871 244 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 GCSHP23434 173 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 PDE6HQ13956 83 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 IGFL2Q6UWQ7 119 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 ZNF562Q6V9R5 426 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 C8orf49Q96NF6 230 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 SIGLEC9Q9Y336 463 aa7.61□□□□□ -1.19
HOXA1-201ENST00000343060 TNFRSF13BO14836 293 aaPredicted RBP7.6□□□□□ -1.19
HOXA1-201ENST00000343060 LAMTOR5O43504 91 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 SH2D1AO60880 128 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 BMI1P35226 326 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 TCTAP57738 103 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 ZNF474Q6S9Z5 364 aaPredicted RBP7.6□□□□□ -1.19
HOXA1-201ENST00000343060 RASL11BQ9BPW5 248 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 A0A1B0GV72 72 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 GAGE12HA6NDE8 117 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 IGLC6P0CF74 106 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 WT1P19544 449 aaPredicted RBP7.6□□□□□ -1.19
HOXA1-201ENST00000343060 FXYD7P58549 80 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 TM4SF20Q53R12 229 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 DHRS13Q6UX07 377 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 CEND1Q8N111 149 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 ASCL2Q99929 193 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 GTSF1LQ9H1H1 148 aa7.6□□□□□ -1.19
HOXA1-201ENST00000343060 TSSC4Q9Y5U2 329 aaPredicted RBP7.6□□□□□ -1.19
HOXA1-201ENST00000343060 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 A0A1W2PRD5 423 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 A0A1W2PRF3 423 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 A0A1W2PRM7 423 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 J3QR89 54 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 K7ERJ3 54 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 CKS2P33552 79 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 SRSF2Q01130 221 aaKnown RBP7.59□□□□□ -1.19
HOXA1-201ENST00000343060 TAL2Q16559 108 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 NUP37Q8NFH4 326 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 SRSF8Q9BRL6 282 aaKnown RBP7.59□□□□□ -1.19
HOXA1-201ENST00000343060 CNFNQ9BYD5 112 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 GOSR1O95249 250 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 FCER1GP30273 86 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 TMEM155Q4W5P6 130 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 RNF185Q96GF1 192 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 ATP6V0BQ99437 205 aa7.59□□□□□ -1.19
HOXA1-201ENST00000343060 URB1O60287 2271 aaKnown RBP7.59□□□□□ -1.19
HOXA1-201ENST00000343060 TRAV17A0A0B4J275 112 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 IGLL5B9A064 214 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 M0R3E3 92 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF207O43670 478 aaKnown RBP7.58□□□□□ -1.2
HOXA1-201ENST00000343060 IGKCP01834 107 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 CNTFRP26992 372 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 MAP1LC3AQ9H492 121 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 K7EIM0 57 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 LOXP28300 417 aaPredicted RBP7.58□□□□□ -1.2
HOXA1-201ENST00000343060 PLGLAQ15195 96 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 TCTEX1D4Q5JR98 221 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 ZNF491Q8N8L2 437 aa7.58□□□□□ -1.2
HOXA1-201ENST00000343060 NXT2Q9NPJ8 142 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms