RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RAB9BQ9NP90 201 aa7.46□□□□□ -1.22
NECAP1-201ENST00000339754 MRPL16Q9NX20 251 aaKnown RBP7.46□□□□□ -1.22
NECAP1-201ENST00000339754 NCOR1O75376 2440 aa7.46□□□□□ -1.22
NECAP1-201ENST00000339754 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 SRSF1Q07955 248 aaKnown RBP eCLIP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 MRPL51Q4U2R6 128 aaKnown RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 FAM201AQ5SY85 155 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 AMTNQ6UX39 209 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 ZNF833PQ6ZTB9 187 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 ZNF502Q8TBZ5 544 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 TPPP3Q9BW30 176 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 ZNF71Q9NQZ8 489 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 LINC00312Q9Y6C7 94 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 A0A1W2PNU3 283 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 SHISA9B4DS77 424 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 CECR9P0C854 216 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 ODF1Q14990 250 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 Q6AWC8 147 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 MRPL20Q9BYC9 149 aaKnown RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 DEFB127Q9H1M4 99 aa7.45□□□□□ -1.22
NECAP1-201ENST00000339754 RPUSD1Q9UJJ7 312 aaKnown RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 HEATR1Q9H583 2144 aaKnown RBP7.45□□□□□ -1.22
NECAP1-201ENST00000339754 TSPAN13O95857 204 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 MEOX1P50221 254 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 MZT1Q08AG7 82 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 MSMPQ1L6U9 139 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 C12orf74Q32Q52 190 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 LYZL1Q6UWQ5 148 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 MOGAT3Q86VF5 341 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 MTURNQ8N3F0 131 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 SPRR3Q9UBC9 169 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 NPIPB5A8MRT5 1133 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 NPYP01303 97 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 EVI2AP22794 236 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 PVRIGQ6DKI7 326 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 TTC9CQ8N5M4 171 aa7.44□□□□□ -1.22
NECAP1-201ENST00000339754 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-201ENST00000339754 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 PRRG2O14669 202 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 TNFRSF1AP19438 455 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 Q6ZT83 130 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 C8orf86Q6ZUL3 223 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 IGLV2-23P01705 113 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 PRB4P10163 310 aaPredicted RBP7.43□□□□□ -1.22
NECAP1-201ENST00000339754 C5orf64Q2M2E5 130 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 GTSCR1Q86UQ5 136 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 MAPKAPK5-AS1Q8N8E1 139 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 OR10X1Q8NGY0 326 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 SVILO95425 2214 aa7.43□□□□□ -1.22
NECAP1-201ENST00000339754 LINC01546A6NGU7 62 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 THBDP07204 575 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 FOXI1Q12951 378 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 MRGPRG-AS1Q2M3A8 158 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 HCP5Q6MZN7 132 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 C17orf77Q96MU5 243 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 SPRY4Q9C004 299 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 PLXNB1O43157 2135 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 AGRNO00468 2067 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 IGKCP01834 107 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 GATA3P23771 443 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 RRN3P1Q2M238 152 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 HIGD1AQ9Y241 93 aa7.42□□□□□ -1.22
NECAP1-201ENST00000339754 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 IGHV1-18A0A0C4DH31 117 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 A0A1B0GWB2 263 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 IGLV1-44P01699 117 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 HLA-DRB4P13762 266 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 CKS2P33552 79 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 TAL2Q16559 108 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 KLF17Q5JT82 389 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-201ENST00000339754 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 OR4C13Q8NGP0 309 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
NECAP1-201ENST00000339754 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 HLA-DRB4X5D2U9 266 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 TRBV19A0A075B6N1 114 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 TRGV5A0A0B4J1U4 118 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 OR11H12B2RN74 326 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 TM4SF5O14894 197 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 MT-ATP8P03928 68 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 PPIFP30405 207 aaKnown RBP7.41□□□□□ -1.22
NECAP1-201ENST00000339754 SRSF6Q13247 344 aaKnown RBP7.41□□□□□ -1.22
NECAP1-201ENST00000339754 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 OR11H1Q8NG94 326 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 OR11H2Q8NH07 326 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 GAFA1Q96PS6 74 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
NECAP1-201ENST00000339754 MED13Q9UHV7 2174 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms