RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 C4orf3Q8WVX3 66 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 C16orf74Q96GX8 76 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 NIT2Q9NQR4 276 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 FCN3O75636 299 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 FABP2P12104 132 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 HOXD3P31249 432 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-201ENST00000336596 ADORA2A-AS1P86434 159 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 RHOHQ15669 191 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 TTC9CQ8N5M4 171 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 MRPL53Q96EL3 112 aaKnown RBP5.93□□□□□ -1.46
EPHA3-201ENST00000336596 IGHV7-4-1A0A0J9YVY3 117 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 TSPAN13O95857 204 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 FBLN7Q53RD9 439 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 SHANK2-AS3Q9BTD1 123 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 PARLQ9H300 379 aa5.93□□□□□ -1.46
EPHA3-201ENST00000336596 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 H3BTX0 84 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 PRB1P04280 392 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 ZNF329Q86UD4 541 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 OR11H6Q8NGC7 330 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 OR11H7Q8NGC8 314 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 RNF138Q8WVD3 245 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 IMMP2LQ96T52 175 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 RARRES2Q99969 163 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 WDR83OSQ9Y284 106 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 NCOR2Q9Y618 2525 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 DEFB130BP0DP73 79 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 DEFB130AP0DP74 79 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 AZU1P20160 251 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 LINC00527Q9UJ94 153 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 PTPRQQ9UMZ3 2332 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 TFF3Q07654 80 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 MRAPQ8TCY5 172 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 IGKV1-27A0A075B6S5 117 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 ZNF843Q8N446 348 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 C15orf53Q8NAA6 179 aa5.92□□□□□ -1.46
EPHA3-201ENST00000336596 LOXP28300 417 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 ZNF48Q96MX3 618 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 SDHCQ99643 169 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 TMEM238C9JI98 176 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 KLK15Q9H2R5 256 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 LY96Q9Y6Y9 160 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 ACACBO00763 2458 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 IGHV1OR15-1A0A075B7D0 117 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 TRAV12-3A0A0B4J271 114 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 LY6HO94772 140 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 SELLP14151 372 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 GATA2P23769 480 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 NTF4P34130 210 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 LINC00158P58513 81 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 PRB3Q04118 309 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 THAP8Q8NA92 274 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 OR10D4PQ8NGN7 298 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 UBE2E2Q96LR5 201 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 LAGE3Q14657 143 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 ZNF880Q6PDB4 577 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 SLC25A34Q6PIV7 304 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 RTBDNQ9BSG5 229 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 C10orf142B7Z368 130 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 CDKN1BP46527 198 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 MRPL23Q16540 153 aaKnown RBP5.91□□□□□ -1.46
EPHA3-201ENST00000336596 C6orf226Q5I0X4 101 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 SPATA25Q9BR10 227 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 CACNA1AO00555 2505 aa5.91□□□□□ -1.46
EPHA3-201ENST00000336596 PAX4O43316 350 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 CRLF1O75462 422 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 IGHV3-48P01763 117 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 IGHV4-39P01824 125 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 TRGC2P03986 189 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 ATP5G1P05496 136 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 ATP5G3P48201 142 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 TMEM75Q8N9X5 138 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 GFI1Q99684 422 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 WNK2Q9Y3S1 2297 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 APOHP02749 345 aaPredicted RBP5.9□□□□□ -1.46
EPHA3-201ENST00000336596 PLA2G2AP14555 144 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 C9orf62Q8N4C0 152 aa5.9□□□□□ -1.46
EPHA3-201ENST00000336596 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.46
EPHA3-201ENST00000336596 A0A087WWC5 75 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 MYMXA0A1B0GTQ4 84 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 GRIFINA4D1Z8 144 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 HBDP02042 147 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 VPS25Q9BRG1 176 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM243Q9BU79 118 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 CHTOPQ9Y3Y2 248 aaKnown RBP5.9□□□□□ -1.47
EPHA3-201ENST00000336596 COQ2Q96H96 371 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 C20orf144Q9BQM9 153 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 COX11Q9Y6N1 276 aa5.9□□□□□ -1.47
EPHA3-201ENST00000336596 A0A0A6YYD4 124 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 C15orf62A8K5M9 175 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 HILS1P60008 231 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 ZNF876PQ49A33 203 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM141Q96I45 108 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 F8VVB4 439 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 F8VWA3 439 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 MAPK1IP1LQ8NDC0 245 aa5.89□□□□□ -1.47
EPHA3-201ENST00000336596 GFRA4Q9GZZ7 299 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms