RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 NDFIP1Q9BT67 221 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 RAXQ9Y2V3 346 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 OVOL3O00110 214 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 NDPQ00604 133 aa18.37■□□□□ 0.53
NDEL1-201ENST00000334527 IGHV1-24A0A0C4DH33 117 aa18.36■□□□□ 0.53
NDEL1-201ENST00000334527 HNRNPA3P51991 378 aaKnown RBP18.36■□□□□ 0.53
NDEL1-201ENST00000334527 VMO1Q7Z5L0 202 aa18.36■□□□□ 0.53
NDEL1-201ENST00000334527 SPATA12Q7Z6I5 190 aa18.36■□□□□ 0.53
NDEL1-201ENST00000334527 TMEM70Q9BUB7 260 aa18.36■□□□□ 0.53
NDEL1-201ENST00000334527 LPAR2Q9HBW0 351 aa18.36■□□□□ 0.53
NDEL1-201ENST00000334527 TRAV9-2A0A087WT02 112 aa18.35■□□□□ 0.53
NDEL1-201ENST00000334527 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.35■□□□□ 0.53
NDEL1-201ENST00000334527 S100A7AQ86SG5 101 aa18.35■□□□□ 0.53
NDEL1-201ENST00000334527 A0A1B0GUT8 65 aa18.35■□□□□ 0.53
NDEL1-201ENST00000334527 F8W735 103 aaPredicted RBP18.35■□□□□ 0.53
NDEL1-201ENST00000334527 CCDC144NLQ6NUI1 221 aa18.35■□□□□ 0.53
NDEL1-201ENST00000334527 ARMS2P0C7Q2 107 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 LINC00614P0C842 121 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 TTC9CQ8N5M4 171 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 ZNF48Q96MX3 618 aaPredicted RBP18.34■□□□□ 0.53
NDEL1-201ENST00000334527 IGHV3-23P01764 117 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 CRIP1P50238 77 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 AAMDCQ9H7C9 122 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 C21orf62Q9NYP8 219 aa18.34■□□□□ 0.53
NDEL1-201ENST00000334527 UCNP55089 124 aa18.33■□□□□ 0.53
NDEL1-201ENST00000334527 COL5A1-AS1Q5SY13 56 aa18.33■□□□□ 0.53
NDEL1-201ENST00000334527 PDE6HQ13956 83 aa18.33■□□□□ 0.52
NDEL1-201ENST00000334527 TMEM208Q9BTX3 173 aa18.33■□□□□ 0.52
NDEL1-201ENST00000334527 RIGQ13278 110 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 LINC00173Q6ZV60 143 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 C8orf49Q96NF6 230 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 NDUFB8O95169 186 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 ZNF138P52744 262 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 Q8N6K4 173 aa18.32■□□□□ 0.52
NDEL1-201ENST00000334527 LEPROTL1O95214 131 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 TFPI2P48307 235 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 ZNF124Q15973 351 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 C1orf122Q6ZSJ8 110 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 TPPP3Q9BW30 176 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 LAMTOR2Q9Y2Q5 125 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 CSMD1Q96PZ7 3565 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 C20orf202A1L168 122 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 IGLL1P15814 213 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 THYN1Q9P016 225 aa18.31■□□□□ 0.52
NDEL1-201ENST00000334527 OR2T8A6NH00 312 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 CT45A10P0DMU9 189 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 ZFP36P26651 326 aaKnown RBP18.3■□□□□ 0.52
NDEL1-201ENST00000334527 OOSP1A8MZH6 123 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 CRXO43186 299 aaPredicted RBP18.3■□□□□ 0.52
NDEL1-201ENST00000334527 TMEM11P17152 192 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 TSPOP30536 169 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 CSN1S1P47710 185 aa18.3■□□□□ 0.52
NDEL1-201ENST00000334527 NBASA2RRP1 2371 aa18.29■□□□□ 0.52
NDEL1-201ENST00000334527 IGF2RP11717 2491 aa18.29■□□□□ 0.52
NDEL1-201ENST00000334527 SYS1-DBNDD2H3BUS1 97 aa18.29■□□□□ 0.52
NDEL1-201ENST00000334527 OR4C46A6NHA9 309 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 DLEU1O43261 78 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 CSN3P07498 182 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 MINOS1Q5TGZ0 78 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 C1RLQ9NZP8 487 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 MINOS1-NBL1R4GNA1 71 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 EBI3Q14213 229 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 Q6AWC8 147 aa18.28■□□□□ 0.52
NDEL1-201ENST00000334527 PSG9Q00887 426 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 DTX2Q86UW9 622 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 STPG4Q8N801 248 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 A0A1B0GW15 77 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 GATD1Q8NB37 220 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 TMUB1Q9BVT8 246 aa18.27■□□□□ 0.52
NDEL1-201ENST00000334527 EGR2P11161 476 aaPredicted RBP18.26■□□□□ 0.51
NDEL1-201ENST00000334527 IGKV2-40A0A087WW87 121 aaPredicted RBP18.26■□□□□ 0.51
NDEL1-201ENST00000334527 IGHV7-81A0A0B4J1V7 117 aa18.26■□□□□ 0.51
NDEL1-201ENST00000334527 IGKV2D-40P01614 121 aaPredicted RBP18.26■□□□□ 0.51
NDEL1-201ENST00000334527 CTSGP08311 255 aa18.26■□□□□ 0.51
NDEL1-201ENST00000334527 OR5AL1P0C617 328 aa18.26■□□□□ 0.51
NDEL1-201ENST00000334527 RPL7P18124 248 aaKnown RBP18.26■□□□□ 0.51
NDEL1-201ENST00000334527 MRPS16Q9Y3D3 137 aaKnown RBP18.26■□□□□ 0.51
NDEL1-201ENST00000334527 SERTM2A0A1B0GWG4 89 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 NDUFS7O75251 213 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 TMSB15BA0A087X1C1 80 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 SCGB2A1O75556 95 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 GAGE1Q13065 139 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 RABAC1Q9UI14 185 aa18.25■□□□□ 0.51
NDEL1-201ENST00000334527 A0A1W2PPR1 153 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 SIRPDQ9H106 197 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 ATRXP46100 2492 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 TMEM189A5PLL7 270 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 SH2D1AO60880 128 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 Q8N9W7 124 aa18.24■□□□□ 0.51
NDEL1-201ENST00000334527 NPSP0C0P6 89 aa18.23■□□□□ 0.51
NDEL1-201ENST00000334527 DMRTA1Q5VZB9 504 aa18.23■□□□□ 0.51
NDEL1-201ENST00000334527 MAP1LC3CQ9BXW4 147 aa18.23■□□□□ 0.51
NDEL1-201ENST00000334527 GOLT1BQ9Y3E0 138 aa18.23■□□□□ 0.51
NDEL1-201ENST00000334527 HINT1P49773 126 aaPredicted RBP18.23■□□□□ 0.51
NDEL1-201ENST00000334527 LYZL1Q6UWQ5 148 aa18.23■□□□□ 0.51
NDEL1-201ENST00000334527 TIMM8BQ9Y5J9 83 aaPredicted RBP18.23■□□□□ 0.51
NDEL1-201ENST00000334527 IGHV3OR16-8A0A075B7F1 116 aa18.22■□□□□ 0.51
NDEL1-201ENST00000334527 FAM106CPP0CH98 169 aa18.22■□□□□ 0.51
NDEL1-201ENST00000334527 RELQ04864 619 aaPredicted RBP18.22■□□□□ 0.51
NDEL1-201ENST00000334527 HSPB8Q9UJY1 196 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms