RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 LGALS9CQ6DKI2 356 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 SYT8Q8NBV8 401 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 DSCAMO60469 2012 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 APOMO95445 188 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 SPINK8P0C7L1 97 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 KALRNO60229 2985 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 LOC107984156A0A0G2JMH3 177 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 NPYP01303 97 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 ARL17AQ8IVW1 177 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 C8orf49Q96NF6 230 aa16.44■□□□□ 0.22
CMTM4-201ENST00000330687 SRRM5B3KS81 715 aa16.43■□□□□ 0.22
CMTM4-201ENST00000330687 PTPRBP23467 1997 aa16.43■□□□□ 0.22
CMTM4-201ENST00000330687 TMEM105Q8N8V8 129 aa16.43■□□□□ 0.22
CMTM4-201ENST00000330687 LEPP41159 167 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 NDUFA4L2Q9NRX3 87 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 TRBV25-1A0A075B6N4 114 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 SPRR3Q9UBC9 169 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 CT83Q5H943 113 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 ATP1A1-AS1Q5TC04 95 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 HIGD1AQ9Y241 93 aa16.42■□□□□ 0.22
CMTM4-201ENST00000330687 GATA3P23771 443 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 GLMPQ8WWB7 406 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 GFRA4Q9GZZ7 299 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 KLF12Q9Y4X4 402 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 SMG1Q96Q15 3661 aaKnown RBP16.41■□□□□ 0.22
CMTM4-201ENST00000330687 PRR33A8MZF0 331 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 ZNF492Q9P255 531 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 DMXL2Q8TDJ6 3036 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 M0R1B8 84 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 DLX1P56177 255 aa16.41■□□□□ 0.22
CMTM4-201ENST00000330687 TNRC6BQ9UPQ9 1833 aaKnown RBP16.4■□□□□ 0.22
CMTM4-201ENST00000330687 TACC2O95359 2948 aa16.4■□□□□ 0.22
CMTM4-201ENST00000330687 MYCNOSP40205 109 aa16.4■□□□□ 0.22
CMTM4-201ENST00000330687 TMEM189A5PLL7 270 aa16.4■□□□□ 0.22
CMTM4-201ENST00000330687 IGLL5B9A064 214 aa16.4■□□□□ 0.22
CMTM4-201ENST00000330687 MRPL51Q4U2R6 128 aaKnown RBP16.4■□□□□ 0.22
CMTM4-201ENST00000330687 MRAP2Q96G30 205 aa16.4■□□□□ 0.22
CMTM4-201ENST00000330687 KLK15Q9H2R5 256 aa16.39■□□□□ 0.22
CMTM4-201ENST00000330687 NDUFA3O95167 84 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 ZCCHC24Q8N2G6 241 aaKnown RBP16.39■□□□□ 0.21
CMTM4-201ENST00000330687 PSG8Q9UQ74 426 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 TRAV40A0A0B4J280 105 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 A0A1W2PPI3 338 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 H3BVH4 76 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 TMEM178AQ8NBL3 297 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 PTH2Q96A98 100 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 PLSCR4Q9NRQ2 329 aa16.39■□□□□ 0.21
CMTM4-201ENST00000330687 TMEM238LA0A1B0GVL6 79 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 SCGB1A1P11684 91 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 FOXI2Q6ZQN5 318 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 ZNF48Q96MX3 618 aaPredicted RBP16.38■□□□□ 0.21
CMTM4-201ENST00000330687 GAS8-AS1O95177 125 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 MSMPQ1L6U9 139 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 SMPXQ9UHP9 88 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 RALYQ9UKM9 306 aaKnown RBP16.38■□□□□ 0.21
CMTM4-201ENST00000330687 F8W1H4 67 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 MT-ATP8P03928 68 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 GATA1P15976 413 aaPredicted RBP16.38■□□□□ 0.21
CMTM4-201ENST00000330687 MSRB1Q9NZV6 116 aa16.38■□□□□ 0.21
CMTM4-201ENST00000330687 RITA1Q96K30 269 aa16.37■□□□□ 0.21
CMTM4-201ENST00000330687 GP9P14770 177 aa16.37■□□□□ 0.21
CMTM4-201ENST00000330687 IGFL4Q6B9Z1 124 aa16.37■□□□□ 0.21
CMTM4-201ENST00000330687 PRRG2O14669 202 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 CEND1Q8N111 149 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 TMEM75Q8N9X5 138 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 TMEM8BA6NDV4 472 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 CCL8P80075 99 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 Q8TAT8 98 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 TMEM133Q9H2Q1 129 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 CYSLTR1Q9Y271 337 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
CMTM4-201ENST00000330687 IGHV3OR16-8A0A075B7F1 116 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 ORM1P02763 201 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 FAM104BQ5XKR9 115 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 RAB9BQ9NP90 201 aa16.36■□□□□ 0.21
CMTM4-201ENST00000330687 SPTBN1Q01082 2364 aaKnown RBP16.36■□□□□ 0.21
CMTM4-201ENST00000330687 IGKCP01834 107 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 K7ESF4 209 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 PSMB2P49721 201 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 C12orf74Q32Q52 190 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 RNF183Q96D59 192 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 NPIPB5A8MRT5 1133 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 C16orf97H3BN30 126 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 SIVA1O15304 175 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 PLGLAQ15195 96 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.35■□□□□ 0.21
CMTM4-201ENST00000330687 OTORQ9NRC9 128 aa16.35■□□□□ 0.21
CMTM4-201ENST00000330687 FSTL3O95633 263 aa16.34■□□□□ 0.21
CMTM4-201ENST00000330687 TTC9CQ8N5M4 171 aa16.34■□□□□ 0.21
CMTM4-201ENST00000330687 OSR1Q8TAX0 266 aaPredicted RBP16.34■□□□□ 0.21
CMTM4-201ENST00000330687 CRIP1P50238 77 aa16.34■□□□□ 0.21
CMTM4-201ENST00000330687 SLC25A39Q9BZJ4 359 aaPredicted RBP16.34■□□□□ 0.21
CMTM4-201ENST00000330687 MRPL16Q9NX20 251 aaKnown RBP16.34■□□□□ 0.21
CMTM4-201ENST00000330687 CEP192Q8TEP8 1941 aa16.34■□□□□ 0.21
CMTM4-201ENST00000330687 AKAP6Q13023 2319 aa16.34■□□□□ 0.21
CMTM4-201ENST00000330687 POU2AF1Q16633 256 aa16.33■□□□□ 0.21
CMTM4-201ENST00000330687 CR1LQ2VPA4 569 aa16.33■□□□□ 0.21
CMTM4-201ENST00000330687 MZT1Q08AG7 82 aa16.33■□□□□ 0.2
CMTM4-201ENST00000330687 MAPKAPK5-AS1Q8N8E1 139 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms