RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 PPBPP02775 128 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 DOCK7Q96N67 2140 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 F8VVB4 439 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 F8VWA3 439 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 RASL10AQ92737 203 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 NDUFAF3Q9BU61 184 aa9.99□□□□□ -0.81
CACNA1F-201ENST00000323022 F2Z2F3 143 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 VWC2LB2RUY7 222 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 B3GALT5-AS1P59052 145 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 Q8TAT8 98 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 TMEM126AQ9H061 195 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 CLDN16Q9Y5I7 305 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 SMAD5-AS1Q9Y6J3 95 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 TRAV12-2A0A075B6T6 113 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 MAJINQ3KP22 176 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 RNF5Q99942 180 aa9.98□□□□□ -0.81
CACNA1F-201ENST00000323022 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 LGALS1P09382 135 aaKnown RBP9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 ZNF562Q6V9R5 426 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 CD55P08174 381 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 IGHV4-38-2P0DP08 117 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 TMEM238C9JI98 176 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 A0A1B0GTI1 187 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 TEX43Q6ZNM6 134 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 THAP8Q8NA92 274 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 ZNF319Q9P2F9 582 aa9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
CACNA1F-201ENST00000323022 ADORA2A-AS1P86434 159 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 PRORYQ9H606 182 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 CREBBPQ92793 2442 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 SHISA3A0PJX4 238 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 CCL20P78556 96 aa9.96□□□□□ -0.81
CACNA1F-201ENST00000323022 IGKV1D-12P01611 117 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 PSG3Q16557 428 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 SLX1AQ9BQ83 275 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 USF3Q68DE3 2245 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 SRP19P09132 144 aaKnown RBP9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 LAGE3Q14657 143 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 FER1L5A0AVI2 2057 aa9.96□□□□□ -0.82
CACNA1F-201ENST00000323022 LINC00114Q6XXX2 140 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 ZNF48Q96MX3 618 aaPredicted RBP9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 RSPO3Q9BXY4 272 aaPredicted RBP9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 GAGE6Q13070 117 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 IL17DQ8TAD2 202 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 ORAOV1Q8WV07 137 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 TRAV3A0A0B4J244 114 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 ANGP03950 147 aaKnown RBP9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 SLURP1P55000 103 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 CADP27708 2225 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 A8MWV9 139 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 ZNF138P52744 262 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 IGFBPL1Q8WX77 278 aa9.95□□□□□ -0.82
CACNA1F-201ENST00000323022 SCN8AQ9UQD0 1980 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 AMBPP02760 352 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 PLEKHB2Q96CS7 222 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 LINC00205P59089 165 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 SEC11AP67812 179 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 DEFB4AO15263 64 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 ADMP35318 185 aa9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 FNDC4Q9H6D8 234 aaPredicted RBP9.94□□□□□ -0.82
CACNA1F-201ENST00000323022 DOCK4Q8N1I0 1966 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 PLXNA3P51805 1871 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 SERF1AO75920 110 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 FAM90A2PQ658T7 463 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 ANAPC13Q9BS18 74 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 IGKV1-9A0A0C4DH69 117 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 ITGB1BP1O14713 200 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 ELANEP08246 267 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 LEPROTO15243 131 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 BTCP35070 178 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 Q6ZQT7 251 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
CACNA1F-201ENST00000323022 EFNB3Q15768 340 aa9.92□□□□□ -0.82
CACNA1F-201ENST00000323022 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
CACNA1F-201ENST00000323022 RPL23P62829 140 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms