RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 VN1R17PQ8TDU5 208 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 SMIM12Q96EX1 92 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 HIF1ANQ9NWT6 349 aa5.9□□□□□ -1.46
IFT88-201ENST00000319980 HIGD1CA8MV81 97 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 NUPR1O60356 82 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 IGLV2-11P01706 119 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 CRISP2P16562 243 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 LY6EQ16553 131 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 WDR73Q6P4I2 378 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 CLEC19AQ6UXS0 136 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 Q71RC1 249 aaPredicted RBP5.9□□□□□ -1.47
IFT88-201ENST00000319980 NUP35Q8NFH5 326 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 ZNF502Q8TBZ5 544 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 MBD6Q96DN6 1003 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 GRAMD2BQ96HH9 432 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 NEU1Q99519 415 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 TXN2Q99757 166 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 ASCL2Q99929 193 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 GNB4Q9HAV0 340 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 MOB4Q9Y3A3 225 aa5.9□□□□□ -1.47
IFT88-201ENST00000319980 TRBV9A0A0B4J1U6 114 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 IZUMO1RA6ND01 250 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 TMEM136Q6ZRR5 245 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 TMEM18Q96B42 140 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 DAZAP1Q96EP5 407 aaKnown RBP5.89□□□□□ -1.47
IFT88-201ENST00000319980 ZNF331Q9NQX6 463 aaPredicted RBP5.89□□□□□ -1.47
IFT88-201ENST00000319980 RABAC1Q9UI14 185 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 CSPG4Q6UVK1 2322 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 PTPN13Q12923 2485 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 P01737 135 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 MT-ND6P03923 174 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 RPL7P18124 248 aaKnown RBP5.89□□□□□ -1.47
IFT88-201ENST00000319980 TOMM20LQ6UXN7 152 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 Q86TA4 180 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 LYPD1Q8N2G4 141 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 GBGT1Q8N5D6 347 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 MEGF9Q9H1U4 602 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 AAMDCQ9H7C9 122 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 FBN2P35556 2912 aa5.89□□□□□ -1.47
IFT88-201ENST00000319980 B4DSR2 109 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 BMPR1BO00238 502 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 AVPP01185 164 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 COX6B1P14854 86 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 COL8A1P27658 744 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 S100A12P80511 92 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 TCF24Q7RTU0 167 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 CCDC140Q96MF4 163 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 TRAV41A0A0B4J266 112 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 H3BUX3 64 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 K7EQM0 130 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 CAMPP49913 170 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 PDE6HQ13956 83 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 BAGE3Q86Y29 109 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 PRSS22Q9GZN4 317 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
IFT88-201ENST00000319980 TP53TG3Q9ULZ0 132 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 IGHV3OR16-13A0A075B7E8 117 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 C19orf71A6NCJ1 209 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 HLA-DQA1P01909 254 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 COX19Q49B96 90 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 CT83Q5H943 113 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 MAPK1IP1LQ8NDC0 245 aa5.88□□□□□ -1.47
IFT88-201ENST00000319980 NOL4LQ96MY1 436 aaPredicted RBP5.88□□□□□ -1.47
IFT88-201ENST00000319980 IGHV3-66A0A0C4DH42 116 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 A8MWL6 223 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 F2Z2F3 143 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 SERF1AO75920 110 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 SLAQ13239 276 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 PSG3Q16557 428 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 IGFL4Q6B9Z1 124 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 TMEM75Q8N9X5 138 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 GTSF1Q8WW33 167 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 EEF1AKMT3Q96AZ1 226 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 PSG8Q9UQ74 426 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 APCSP02743 223 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 GZMBP10144 247 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 SRIP30626 198 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 CSN1S1P47710 185 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 BLCAPP62952 87 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 ATP5G2Q06055 141 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 JOSD1Q15040 202 aaPredicted RBP5.87□□□□□ -1.47
IFT88-201ENST00000319980 PRR31Q5SQ13 230 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 ZC2HC1AQ96GY0 325 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 SSBP4Q9BWG4 385 aaPredicted RBP5.87□□□□□ -1.47
IFT88-201ENST00000319980 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 ZFP30Q9Y2G7 519 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 SMAD5-AS1Q9Y6J3 95 aa5.87□□□□□ -1.47
IFT88-201ENST00000319980 FASNP49327 2511 aaKnown RBP5.86□□□□□ -1.47
IFT88-201ENST00000319980 IGHV3-49A0A0A0MS15 119 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 TRBV7-1A0A0A6YYK4 115 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 LINC00587B1AMM8 73 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 DSCR9P59020 149 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 LINC00310P59036 64 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 PSG9Q00887 426 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 KLK9Q2XQG4 91 aa5.86□□□□□ -1.47
IFT88-201ENST00000319980 GDF5OSQ5U4N7 250 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms