RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 PLEKHA3Q9HB20 300 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 NHP2Q9NX24 153 aaKnown RBP7.54□□□□□ -1.2
CAPN3-201ENST00000318023 J3KRW8 73 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 IGHV4-39P01824 125 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-201ENST00000318023 H2BFWTQ7Z2G1 175 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 C1orf162Q8NEQ5 155 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-201ENST00000318023 CHCHD1Q96BP2 118 aaKnown RBP7.54□□□□□ -1.2
CAPN3-201ENST00000318023 IDI2-AS1Q9NZ38 188 aa7.54□□□□□ -1.2
CAPN3-201ENST00000318023 C17orf98A8MV24 154 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 A8MWL6 223 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 SYNGR1O43759 233 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 IGKV3-15P01624 115 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 AREGP15514 252 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 CATR1Q13166 79 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 GCSAMQ8N6F7 178 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 IGF2BP2-AS1Q96M15 143 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 CITED1Q99966 193 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 hCG_38984A0A1B0GV85 526 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 A0A1B0GWB2 263 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 F8W1H4 67 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 OR9G9P0C7N8 305 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 FGF12P61328 243 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 TBC1D28Q2M2D7 210 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-201ENST00000318023 GTSF1Q8WW33 167 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 OR2H1Q9GZK4 316 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-201ENST00000318023 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-201ENST00000318023 APOMO95445 188 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 MPV17P39210 176 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 FXYD7P58549 80 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 ABHD12Q8N2K0 398 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 LINC00312Q9Y6C7 94 aa7.53□□□□□ -1.2
CAPN3-201ENST00000318023 AGRNO00468 2067 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 TRAV24A0A0B4J272 114 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 Q6ZUT4 128 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 PIP4P2Q8N4L2 257 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 C1orf159Q96HA4 380 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 IGHV4-30-2A0A087WSY4 118 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 SCGB2A1O75556 95 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 ARL3P36405 182 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 HBBP68871 147 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
CAPN3-201ENST00000318023 TET2Q6N021 2002 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-201ENST00000318023 TEX50A0A1B0GTY4 177 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-201ENST00000318023 SYNGR3O43761 229 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 BRWD1-AS2P59051 145 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 FAM162BQ5T6X4 162 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 FAM27BQ5VT28 67 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 HSD17B10Q99714 261 aaKnown RBP7.51□□□□□ -1.21
CAPN3-201ENST00000318023 COL6A5A8TX70 2615 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 ARHGAP32A7KAX9 2087 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 PRSS29PA6NIE9 313 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 MGST3O14880 152 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 P0C879 139 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CT45A6P0DMU7 189 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CT45A5P0DMU8 189 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CT45A7P0DMV0 189 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 GPR12P47775 334 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CACNG7P62955 275 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 GAGE13Q4V321 117 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 OR4X2Q8NGF9 303 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 ZNF503Q96F45 646 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 ZNF747Q9BV97 191 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 A0A1B0GXF2 115 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 NPIPB5A8MRT5 1133 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 TIMM8AO60220 97 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-201ENST00000318023 MPDU1O75352 247 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 LTAP01374 205 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 IGLV1-44P01699 117 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 C10orf128Q5T292 105 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 VKORC1L1Q8N0U8 176 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 FAM169BQ8N8A8 192 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 OR9G4Q8NGQ1 327 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 CCL17Q92583 94 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 HARBI1Q96MB7 349 aa7.51□□□□□ -1.21
CAPN3-201ENST00000318023 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 FNDC10F2Z333 226 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 APOHP02749 345 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-201ENST00000318023 FAM106CPP0CH98 169 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 FAM106AQ4KMX7 169 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 SPRNQ5BIV9 151 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
CAPN3-201ENST00000318023 SSBP2P81877 361 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-201ENST00000318023 MKXQ8IYA7 352 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms