RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 C3orf36Q3SXR2 165 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 ZNF329Q86UD4 541 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 OR4C13Q8NGP0 309 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 TRBV6-6A0A0A6YYG2 114 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 IQCF6A8MYZ5 107 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 TCRAP04437 139 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 GCSAMQ8N6F7 178 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 OR11H1Q8NG94 326 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 OR11H2Q8NH07 326 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 ARPC1AQ92747 370 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 C19orf24Q9BVV8 132 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 CYSLTR1Q9Y271 337 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 ABCA2Q9BZC7 2435 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 IGKV1D-17A0A075B6S4 117 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 IGKV2-40A0A087WW87 121 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 TCRBV4S1A1TA0A5B7 111 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 H3BMG7 143 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 MMP23AO75900 390 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 IGKV2D-40P01614 121 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 HBDP02042 147 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 EMP1P54849 157 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 LYZL1Q6UWQ5 148 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 DEFB125Q8N687 156 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 USP9YO00507 2555 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 M0R381 172 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 PRSS2P07478 247 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 TMPRSS3P57727 454 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 ECSCRQ19T08 205 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 PRR30Q53SZ7 412 aaPredicted RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 SONP18583 2426 aaKnown RBP6.1□□□□□ -1.43
CDHR3-201ENST00000317716 NBEAQ8NFP9 2946 aa6.1□□□□□ -1.43
CDHR3-201ENST00000317716 C10orf142B7Z368 130 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 UTF1Q5T230 341 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 WDR31Q8NA23 367 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 SMIM27A0A1W2PRY6 76 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 SRRM4A7MD48 611 aaKnown RBP6.09□□□□□ -1.43
CDHR3-201ENST00000317716 RNASE2P10153 161 aaKnown RBP6.09□□□□□ -1.43
CDHR3-201ENST00000317716 FAM71F2Q6NXP2 309 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 IGFBPL1Q8WX77 278 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 MS4A6AQ9H2W1 248 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 C1RLQ9NZP8 487 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 SPRR3Q9UBC9 169 aa6.09□□□□□ -1.43
CDHR3-201ENST00000317716 FAM27E3Q08E93 113 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 GAGE13Q4V321 117 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 GDF5OSQ5U4N7 250 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 CENPVQ7Z7K6 275 aaPredicted RBP6.09□□□□□ -1.44
CDHR3-201ENST00000317716 FAM90A1Q86YD7 464 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 C9orf106Q8NAJ2 232 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 DKK2Q9UBU2 259 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 RELNP78509 3460 aa6.09□□□□□ -1.44
CDHR3-201ENST00000317716 C9orf118A6NHY6 69 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 LYNX1G3V0Z9 82 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
CDHR3-201ENST00000317716 WISP2O76076 250 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 LYNX1P0DP58 116 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 PRTN3P24158 256 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 RAB9AP51151 201 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 Q6ZT83 130 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 Q8TCH9 128 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 FMC1Q96HJ9 113 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 SLC25A2Q9BXI2 301 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 LY96Q9Y6Y9 160 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 HELZ2Q9BYK8 2649 aaKnown RBP6.08□□□□□ -1.44
CDHR3-201ENST00000317716 SMG1Q96Q15 3661 aaKnown RBP6.08□□□□□ -1.44
CDHR3-201ENST00000317716 IGKV1OR2-108A0A075B7D4 117 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 SMIM17P0DL12 118 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 RNFT1Q5M7Z0 435 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 C11orf52Q96A22 123 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 NAV2Q8IVL1 2488 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 COX8AP10176 69 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 RHOGP84095 191 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 DIAPH2-AS1Q14236 149 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 OR4X2Q8NGF9 303 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 TPSG1Q9NRR2 321 aa6.08□□□□□ -1.44
CDHR3-201ENST00000317716 IGHV3-64A0A075B6Q5 118 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 CTRLP40313 264 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 BRWD1-AS2P59051 145 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM75Q8N9X5 138 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 CACNG8Q8WXS5 425 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 CHAC1Q9BUX1 264 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 NACAE9PAV3 2078 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 KMT2EQ8IZD2 1858 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 IGKV3D-15A0A087WSY6 115 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 K7EP34 96 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 IGKV3-15P01624 115 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 NRN1LQ496H8 165 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 TMEM170BQ5T4T1 132 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
CDHR3-201ENST00000317716 H0YJW9 148 aa6.07□□□□□ -1.44
CDHR3-201ENST00000317716 SPRY2O43597 315 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms