RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 NDUFA4L2Q9NRX3 87 aa10.94□□□□□ -0.66
PROM2-201ENST00000317620 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
PROM2-201ENST00000317620 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 H3BRM9 83 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 MSMBP08118 114 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 SP5Q6BEB4 398 aaPredicted RBP10.93□□□□□ -0.66
PROM2-201ENST00000317620 MAPK1IP1LQ8NDC0 245 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 RHPN1-AS1Q9BWJ2 59 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 DKK1O94907 266 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 ZNF134P52741 427 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 ORMDL2Q53FV1 153 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 LYPD1Q8N2G4 141 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 NUP35Q8NFH5 326 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 SRSF8Q9BRL6 282 aaKnown RBP10.93□□□□□ -0.66
PROM2-201ENST00000317620 ALKBH7Q9BT30 221 aaPredicted RBP10.93□□□□□ -0.66
PROM2-201ENST00000317620 LAMTOR2Q9Y2Q5 125 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 K7EM74 188 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 OVOL3O00110 214 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 LINC01356Q8N9X3 169 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 SAP30O75446 220 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 PSG3Q16557 428 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 TMEM256Q8N2U0 113 aa10.93□□□□□ -0.66
PROM2-201ENST00000317620 D6R8Y8 96 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 NDUFS8O00217 210 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 TEX36Q5VZQ5 186 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 RNF138Q8WVD3 245 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
PROM2-201ENST00000317620 IGKV3D-20A0A0C4DH25 116 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 A6NNC1 897 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 SSC4DQ8WTU2 575 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 TRGV4A0A0C4DH28 118 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 ATP6V0E1O15342 81 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 ZNF833PQ6ZTB9 187 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
PROM2-201ENST00000317620 SH2D1AO60880 128 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 DPM2O94777 84 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 LINC00477Q96M19 166 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 NDUFB8O95169 186 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 G3V318 75 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 LCNL1Q6ZST4 164 aa10.91□□□□□ -0.66
PROM2-201ENST00000317620 DNAL4O96015 105 aa10.9□□□□□ -0.66
PROM2-201ENST00000317620 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
PROM2-201ENST00000317620 FAM223BA6NKX1 122 aa10.9□□□□□ -0.66
PROM2-201ENST00000317620 FAM223AQ8IWN6 122 aa10.9□□□□□ -0.66
PROM2-201ENST00000317620 KLHL30-AS1Q8NEE0 82 aa10.9□□□□□ -0.66
PROM2-201ENST00000317620 NUP210Q8TEM1 1887 aaPredicted RBP10.9□□□□□ -0.66
PROM2-201ENST00000317620 WT1-ASQ06250 92 aa10.9□□□□□ -0.67
PROM2-201ENST00000317620 ACTL10Q5JWF8 245 aa10.9□□□□□ -0.67
PROM2-201ENST00000317620 EP400Q96L91 3159 aa10.9□□□□□ -0.67
PROM2-201ENST00000317620 TMEM8BA6NDV4 472 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 MRPL52Q86TS9 123 aaKnown RBP10.89□□□□□ -0.67
PROM2-201ENST00000317620 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 PRR14LQ5THK1 2151 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 TDGF1P13385 188 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 SYNJ2BPP57105 145 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 DIAPH2-AS1Q14236 149 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 TMEM249Q2WGJ8 235 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
PROM2-201ENST00000317620 TPSG1Q9NRR2 321 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 CCDC168Q8NDH2 2452 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 IGHV1-69DA0A0B4J2H0 117 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 IGHV1-69P01742 117 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 LURAP1LQ8IV03 231 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 Q8NFD4 153 aa10.89□□□□□ -0.67
PROM2-201ENST00000317620 TCF15Q12870 199 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 DYSFO75923 2080 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 IGHV2-70DA0A0C4DH43 119 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 PDE6HQ13956 83 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 Q86TA4 180 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 GTSCR1Q86UQ5 136 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 FAM110DQ8TAY7 271 aaPredicted RBP10.88□□□□□ -0.67
PROM2-201ENST00000317620 CD28P10747 220 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 FXYD7P58549 80 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 RCHY1Q96PM5 261 aa10.88□□□□□ -0.67
PROM2-201ENST00000317620 RNF166Q96A37 237 aaPredicted RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 GATA3P23771 443 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 YPEL3P61236 119 aaPredicted RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 ERCC8Q13216 396 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 NHP2Q9NX24 153 aaKnown RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 CHTOPQ9Y3Y2 248 aaKnown RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 TNCP24821 2201 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 LAGE3Q14657 143 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
PROM2-201ENST00000317620 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
PROM2-201ENST00000317620 NDUFS7O75251 213 aa10.86□□□□□ -0.67
PROM2-201ENST00000317620 IGKCP01834 107 aa10.86□□□□□ -0.67
PROM2-201ENST00000317620 SFTA2Q6UW10 78 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms