RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SDF2L1Q9HCN8 221 aa3□□□□□ -1.93
GEN1-201ENST00000317402 HIGD1AQ9Y241 93 aa3□□□□□ -1.93
GEN1-201ENST00000317402 U3KQA8 63 aa3□□□□□ -1.93
GEN1-201ENST00000317402 TACC2O95359 2948 aa3□□□□□ -1.93
GEN1-201ENST00000317402 A0A1W2PR77 199 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FAM90A9PA6NNJ1 464 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 LY6HO94772 140 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 ZNF688P0C7X2 276 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 B4GALT1P15291 398 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 CEACAM6P40199 344 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 C19orf54Q5BKX5 351 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 EBLN2Q6P2I7 272 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TEX43Q6ZNM6 134 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TRBV24-1A0A075B6N3 115 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TRGV5A0A0B4J1U4 118 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 MMP23AO75900 390 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 SCTP09683 121 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 ZNF883P0CG24 379 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 NABP2Q9BQ15 211 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 SCNM1Q9BWG6 230 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TSPAN2O60636 221 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 NKX2-2O95096 273 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TMEM78Q5T7P6 136 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 NIPBLQ6KC79 2804 aaeCLIP2.99□□□□□ -1.93
GEN1-201ENST00000317402 IGLV1-36A0A0B4J1U3 117 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TEX48A0A1B0GUV7 120 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 A0A1W2PPM0 123 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 NBEAP1P0C6P0 100 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 VDAC2P45880 294 aaPredicted RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 ZNF441Q8N8Z8 693 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 C3orf85A0A1B0GTC6 90 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 SMIM9A6NGZ8 99 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 ASAH2BP0C7U1 165 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FOXL1Q12952 345 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 BVES-AS1Q5T3Y7 98 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 C9orf47Q6ZRZ4 202 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 CYP2G1PQ6ZSU1 146 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FAM214BQ7L5A3 538 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 CHAC1Q9BUX1 264 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 CSDC2Q9Y534 153 aaKnown RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 IGHV2-26A0A0B4J1V2 119 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FCGR2BP31994 310 aaPredicted RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 ZNF726P1Q15940 193 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 PRSS29PA6NIE9 313 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FAM157AC9JC47 383 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 NDUFC1O43677 76 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 IGHMP01871 453 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 OR9G9P0C7N8 305 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 C3orf79P0CE67 100 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 ECSCRQ19T08 205 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 Q6ZRM9 215 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 FAM57AQ8TBR7 257 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 RNF185Q96GF1 192 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 C4orf45Q96LM5 186 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 TMEM242Q9NWH2 141 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 LYNX1G3V0Z9 82 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 LYNX1P0DP58 116 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 PDLIM4P50479 330 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 PRR30Q53SZ7 412 aaPredicted RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 BCL6BQ8N143 479 aaPredicted RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 FLYWCH2Q96CP2 140 aaKnown RBP2.99□□□□□ -1.93
GEN1-201ENST00000317402 PGLYRP4Q96LB8 373 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 IL36BQ9NZH7 164 aa2.99□□□□□ -1.93
GEN1-201ENST00000317402 IGLV3-32A0A0A0MS00 114 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 HAX1O00165 279 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 CXCL5P42830 114 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 SPATA31B1PQ5VZV4 182 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 DEFB108BQ8NET1 73 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 EEF1AKMT3Q96AZ1 226 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 YPEL4Q96NS1 127 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 DUX3Q96PT4 197 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.98□□□□□ -1.93
GEN1-201ENST00000317402 MGST3O14880 152 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 IBA57Q5T440 356 aaKnown RBP2.98□□□□□ -1.93
GEN1-201ENST00000317402 HIST2H2BCQ6DN03 193 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 Q6ZWC4 215 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 LHFPL6Q9Y693 200 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 C10orf91Q5T1B1 145 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 TMUB1Q9BVT8 246 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 PROK2Q9HC23 129 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 NPIPB11E5RHQ5 1161 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 RPL8P62917 257 aaKnown RBP2.98□□□□□ -1.93
GEN1-201ENST00000317402 C10orf113Q5VZT2 155 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 AQP3Q92482 292 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 TRAV12-3A0A0B4J271 114 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 GUSBP1Q15486 140 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 NPVFQ9HCQ7 196 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 RNASE1P07998 156 aaKnown RBP2.98□□□□□ -1.93
GEN1-201ENST00000317402 CRYBB3P26998 211 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 LINC00114Q6XXX2 140 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 SPATA12Q7Z6I5 190 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 FMC1Q96HJ9 113 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 FBXL7Q9UJT9 491 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 ETV2O00321 342 aaPredicted RBP2.98□□□□□ -1.93
GEN1-201ENST00000317402 TOMM40O96008 361 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 CRYGCP07315 174 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 ZNF708P17019 499 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 PRDX2P32119 198 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 ERVK11-1P61568 191 aa2.98□□□□□ -1.93
GEN1-201ENST00000317402 FAM106AQ4KMX7 169 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms