RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
VAMP2-201ENST00000316509 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
VAMP2-201ENST00000316509 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
VAMP2-201ENST00000316509 HIF1ANQ9NWT6 349 aa10.83□□□□□ -0.68
VAMP2-201ENST00000316509 HIGD1CA8MV81 97 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 COL8A1P27658 744 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 MRPL54Q6P161 138 aaKnown RBP10.82□□□□□ -0.68
VAMP2-201ENST00000316509 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 HRNRQ86YZ3 2850 aaPredicted RBP10.82□□□□□ -0.68
VAMP2-201ENST00000316509 IGHV3OR16-10A0A075B7F0 116 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 LINC01548A6NM66 108 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
VAMP2-201ENST00000316509 TPPP2P59282 170 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 RAB4BP61018 213 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 RBPMS2Q6ZRY4 209 aaKnown RBP10.82□□□□□ -0.68
VAMP2-201ENST00000316509 SGK494Q96LW2 274 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 CLEC5AQ9NY25 188 aa10.82□□□□□ -0.68
VAMP2-201ENST00000316509 A0A1B0GXF2 115 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 BUB3O43684 328 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 TMEM219Q86XT9 240 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 BAGE3Q86Y29 109 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 CCDC140Q96MF4 163 aa10.81□□□□□ -0.68
VAMP2-201ENST00000316509 SPINK4O60575 86 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 LINC00322Q6ZN03 302 aaPredicted RBP10.8□□□□□ -0.68
VAMP2-201ENST00000316509 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
VAMP2-201ENST00000316509 METTL26Q96S19 204 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
VAMP2-201ENST00000316509 Q6AWC8 147 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 LRRC75A-AS1Q8N1F1 130 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
VAMP2-201ENST00000316509 BEX4Q9NWD9 120 aaPredicted RBP10.8□□□□□ -0.68
VAMP2-201ENST00000316509 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 U3KQE9 123 aa10.8□□□□□ -0.68
VAMP2-201ENST00000316509 RELNP78509 3460 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 TRAV8-1A0A0A6YYK1 113 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 A0A1B0GW15 77 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 H3BUX3 64 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 CT45A10P0DMU9 189 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 HBBP68871 147 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 SLC35B1P78383 322 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 FAM162BQ5T6X4 162 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 CFAP46Q8IYW2 2715 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 ZNF785A8K8V0 405 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 A8MWP6 167 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 TRGV3P03979 118 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
VAMP2-201ENST00000316509 MRPL53Q96EL3 112 aaKnown RBP10.79□□□□□ -0.68
VAMP2-201ENST00000316509 MS4A10Q96PG2 267 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 TP53TG3Q9ULZ0 132 aa10.79□□□□□ -0.68
VAMP2-201ENST00000316509 A0A096LNT2 108 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 GRIFINA4D1Z8 144 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 SH2D7A6NKC9 451 aaPredicted RBP10.78□□□□□ -0.68
VAMP2-201ENST00000316509 HAX1O00165 279 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 GZMBP10144 247 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
VAMP2-201ENST00000316509 IQCJQ1A5X6 159 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 OR2D3Q8NGH3 330 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 ZC2HC1AQ96GY0 325 aa10.78□□□□□ -0.68
VAMP2-201ENST00000316509 CLPSL1A2RUU4 121 aa10.77□□□□□ -0.68
VAMP2-201ENST00000316509 C9orf152Q5JTZ5 239 aa10.77□□□□□ -0.68
VAMP2-201ENST00000316509 GTSF1Q8WW33 167 aa10.77□□□□□ -0.68
VAMP2-201ENST00000316509 A0A0G2JLM5 398 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 M0R3E3 92 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 CHEK1O14757 476 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 SERF1AO75920 110 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 SRSF2Q01130 221 aaKnown RBP10.77□□□□□ -0.69
VAMP2-201ENST00000316509 SRSF1Q07955 248 aaKnown RBP eCLIP10.77□□□□□ -0.692e-10■■■■■ 32.8
VAMP2-201ENST00000316509 CYB5R2Q6BCY4 276 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
VAMP2-201ENST00000316509 NDUFA4O00483 81 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 SRIP30626 198 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 BMI1P35226 326 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 RPS20P60866 119 aaKnown RBP10.76□□□□□ -0.69
VAMP2-201ENST00000316509 RIGQ13278 110 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 DMRTA1Q5VZB9 504 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
VAMP2-201ENST00000316509 TMEM89A2RUT3 159 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 NUPR1O60356 82 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 PKIAP61925 76 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 LY6EQ16553 131 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 NOL4LQ96MY1 436 aaPredicted RBP10.76□□□□□ -0.69
VAMP2-201ENST00000316509 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
VAMP2-201ENST00000316509 KMT2BQ9UMN6 2715 aaPredicted RBP10.75□□□□□ -0.69
VAMP2-201ENST00000316509 ARL3P36405 182 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 SLAQ13239 276 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 GDF5OSQ5U4N7 250 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 PRR25Q96S07 402 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 PRDM13Q9H4Q3 707 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 LRBAP50851 2863 aa10.75□□□□□ -0.69
VAMP2-201ENST00000316509 AVPP01185 164 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms