RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 HIST1H2BCP62807 126 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.54
HIPK3-201ENST00000303296 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 C18orf12Q96KH6 178 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.54
HIPK3-201ENST00000303296 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.55
HIPK3-201ENST00000303296 A0A0A6YYD4 124 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 ATRAIDQ6UW56 229 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 IGHV1-3A0A0C4DH29 117 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 ACYP1P07311 99 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 ANKRD29Q8N6D5 301 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 TM2D1Q9BX74 207 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 IGHV1-18A0A0C4DH31 117 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 SLC25A48Q6ZT89 311 aaKnown RBP11.64□□□□□ -0.55
HIPK3-201ENST00000303296 PATJQ8NI35 1801 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 NDUFB1O75438 58 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 LY6HO94772 140 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 UBE2E1P51965 193 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
HIPK3-201ENST00000303296 RHODO00212 210 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 CSRP2Q16527 193 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 LINC01356Q8N9X3 169 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 IGHV4OR15-8A0A075B7B6 117 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 A0A087WW49 117 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 EFNA2O43921 213 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 NDUFC2O95298 119 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 MRPL14Q6P1L8 145 aaKnown RBP11.63□□□□□ -0.55
HIPK3-201ENST00000303296 FAM90A1Q86YD7 464 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 FAM181AQ8N9Y4 354 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 C1QTNF5Q9BXJ0 243 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 ARMS2P0C7Q2 107 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 C15orf53Q8NAA6 179 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
HIPK3-201ENST00000303296 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 TSSC4Q9Y5U2 329 aaPredicted RBP11.62□□□□□ -0.55
HIPK3-201ENST00000303296 TCF20Q9UGU0 1960 aaKnown RBP11.62□□□□□ -0.55
HIPK3-201ENST00000303296 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 TIRAPP58753 221 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 Q96MF0 132 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 MUC4Q99102 2169 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 DSCAML1Q8TD84 2053 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 I3L3M4 83 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 IL18BPO95998 194 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 IGHV1-46P01743 117 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 CHCHD2Q9Y6H1 151 aaPredicted RBP11.62□□□□□ -0.55
HIPK3-201ENST00000303296 WDR81Q562E7 1941 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 OVOL3O00110 214 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 UTF1Q5T230 341 aa11.62□□□□□ -0.55
HIPK3-201ENST00000303296 CD160O95971 181 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 C9orf139Q6ZV77 190 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 TRAV26-2A0A0B4J265 109 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 USMG5Q96IX5 58 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 TRPM7Q96QT4 1865 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 PROP1O75360 226 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 UBE2AP49459 152 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 CARHSP1Q9Y2V2 147 aaKnown RBP11.61□□□□□ -0.55
HIPK3-201ENST00000303296 UBE2CO00762 179 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 C8orf49Q96NF6 230 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 SPRR3Q9UBC9 169 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 CFHR4Q92496 578 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 CARD19Q96LW7 228 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
HIPK3-201ENST00000303296 GREM1O60565 184 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 RGPD3A6NKT7 1758 aaPredicted RBP11.6□□□□□ -0.55
HIPK3-201ENST00000303296 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 A0A1B0GWJ7 208 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.55
HIPK3-201ENST00000303296 EFNA4P52798 201 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 LINC01619G3V211 115 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 LAMB2P55268 1798 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 H0Y9J4 135 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
HIPK3-201ENST00000303296 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 UBE2V1Q13404 147 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 SEM1Q6ZVN7 128 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 GREB1Q4ZG55 1949 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 CXCL1P09341 107 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 CACNA1EQ15878 2313 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 MP68P56378 58 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 FOXF2Q12947 444 aa11.59□□□□□ -0.55
HIPK3-201ENST00000303296 A0A1B0GX51 115 aa11.58□□□□□ -0.56
HIPK3-201ENST00000303296 AMBPP02760 352 aa11.58□□□□□ -0.56
HIPK3-201ENST00000303296 SAA4P35542 130 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms