RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 LIME1Q9H400 295 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
PTCD1-201ENST00000292478 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 WISP1O95388 367 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 TRAV12-3A0A0B4J271 114 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 FCN3O75636 299 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 CRPP02741 224 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 MSMBP08118 114 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 LOXP28300 417 aaPredicted RBP10.31□□□□□ -0.76
PTCD1-201ENST00000292478 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 SSC4DQ8WTU2 575 aa10.31□□□□□ -0.76
PTCD1-201ENST00000292478 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
PTCD1-201ENST00000292478 SAMD5Q5TGI4 173 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 FAM231DQ6ZW35 169 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 C8orf31Q8N9H6 132 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 IGHV2-70DA0A0C4DH43 119 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 CACNA1DQ01668 2161 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 TRAV8-1A0A0A6YYK1 113 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 RNF138Q8WVD3 245 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 RASL10AQ92737 203 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 POU2AF1Q16633 256 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
PTCD1-201ENST00000292478 ANAPC1Q9H1A4 1944 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 INTS1Q8N201 2190 aaKnown RBP10.29□□□□□ -0.76
PTCD1-201ENST00000292478 ZNF503-AS2A6NEH8 195 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 PYY3Q5JQD4 70 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 PRSS46E5RG02 174 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 GUSBP1Q15486 140 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 PIP4P1Q86T03 277 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 WFDC12Q8WWY7 111 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 CSTL1Q9H114 145 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 ESPL1Q14674 2120 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 A8MWV9 139 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
PTCD1-201ENST00000292478 TP53BP1Q12888 1972 aaPredicted RBP10.29□□□□□ -0.76
PTCD1-201ENST00000292478 A6NNC1 897 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 C9JQL5 133 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 M0R2P5 195 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 SPOCK3Q9BQ16 436 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 TRAV8-2A0A0B4J237 113 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 NUP210Q8TEM1 1887 aaPredicted RBP10.28□□□□□ -0.76
PTCD1-201ENST00000292478 ATXN8Q156A1 80 aa10.28□□□□□ -0.76
PTCD1-201ENST00000292478 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
PTCD1-201ENST00000292478 AMN1Q8IY45 258 aa10.27□□□□□ -0.76
PTCD1-201ENST00000292478 THAP8Q8NA92 274 aa10.27□□□□□ -0.76
PTCD1-201ENST00000292478 AKAP6Q13023 2319 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 IGHV4-39P01824 125 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 GAGE13Q4V321 117 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 BCL6BQ8N143 479 aaPredicted RBP10.27□□□□□ -0.77
PTCD1-201ENST00000292478 TRGV1A0A0A0MS02 117 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 J3QLI3 93 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 LY6HO94772 140 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.77
PTCD1-201ENST00000292478 OVOL3O00110 214 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 TMEM249Q2WGJ8 235 aa10.27□□□□□ -0.77
PTCD1-201ENST00000292478 TRPT1Q86TN4 253 aaKnown RBP10.27□□□□□ -0.77
PTCD1-201ENST00000292478 H3BRN7 92 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 ZNF726P1Q15940 193 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 LCNL1Q6ZST4 164 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 FAM215AQ9Y5M1 114 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 PRR30Q53SZ7 412 aaPredicted RBP10.26□□□□□ -0.77
PTCD1-201ENST00000292478 SPTBN1Q01082 2364 aaKnown RBP10.26□□□□□ -0.77
PTCD1-201ENST00000292478 ABCA4P78363 2273 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 TNFRSF6BO95407 300 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 IL15RAQ13261 267 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 Q6ZSR3 168 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 LRRK1Q38SD2 2015 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 NDUFA4O00483 81 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 ARMS2P0C7Q2 107 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
PTCD1-201ENST00000292478 RHODO00212 210 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 ZNRD1Q9P1U0 126 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 ERCC8Q13216 396 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 IGFL4Q6B9Z1 124 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 LINC00158P58513 81 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 FAM104BQ5XKR9 115 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 FANCMQ8IYD8 2048 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 A0A087WX48 190 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 IGF2-ASQ6U949 168 aa10.25□□□□□ -0.77
PTCD1-201ENST00000292478 SNRNP200O75643 2136 aaKnown RBP10.24□□□□□ -0.77
PTCD1-201ENST00000292478 CKS1BP61024 79 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms