RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 CNTFRP26992 372 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 FOXI2Q6ZQN5 318 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 ZNF493Q6ZR52 646 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 ZNF491Q8N8L2 437 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 TLN2Q9Y4G6 2542 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 F5H697 171 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 CRYGBP07316 175 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 PSMG4Q5JS54 123 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 NEU1Q99519 415 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 UBE2CO00762 179 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 MIR17HGQ75NE6 70 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 OR9G4Q8NGQ1 327 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 MGST2Q99735 147 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 TEX22C9J3V5 150 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 F2Z2F3 143 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 SLAQ13239 276 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 PRRC2AP48634 2157 aaKnown RBP6.1□□□□□ -1.43
EPHA4-201ENST00000281821 CHD3Q12873 2000 aaKnown RBP6.1□□□□□ -1.43
EPHA4-201ENST00000281821 K7EIM0 57 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
EPHA4-201ENST00000281821 IBA57Q5T440 356 aaKnown RBP6.1□□□□□ -1.43
EPHA4-201ENST00000281821 Q71RC1 249 aaPredicted RBP6.1□□□□□ -1.43
EPHA4-201ENST00000281821 ARFGEF3Q5TH69 2177 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 IGHV3-23P01764 117 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 YTHDF2Q9Y5A9 579 aaKnown RBP6.09□□□□□ -1.43
EPHA4-201ENST00000281821 DMRT1Q9Y5R6 373 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 RHODO00212 210 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 DDTP30046 118 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR20EP86478 221 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR20CP86479 221 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR20DP86480 221 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR20BP86481 221 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR20AP86496 221 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 SRSF2Q01130 221 aaKnown RBP6.09□□□□□ -1.43
EPHA4-201ENST00000281821 EIF4EBP1Q13541 118 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PRR31Q5SQ13 230 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 DUX3Q96PT4 197 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 LINC00469Q8N7U9 141 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 C11orf44Q8N8P7 122 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 LINC01587Q99440 93 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 NDUFB4O95168 129 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 FOLR2P14207 255 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 CRISP2P16562 243 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 EIF4E3Q8N5X7 224 aaKnown RBP6.09□□□□□ -1.43
EPHA4-201ENST00000281821 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
EPHA4-201ENST00000281821 LSM4Q9Y4Z0 139 aaKnown RBP6.09□□□□□ -1.43
EPHA4-201ENST00000281821 CIDEAO60543 219 aa6.09□□□□□ -1.44
EPHA4-201ENST00000281821 SPINK4O60575 86 aa6.09□□□□□ -1.44
EPHA4-201ENST00000281821 AMTP48728 403 aa6.09□□□□□ -1.44
EPHA4-201ENST00000281821 RNASEKQ6P5S7 137 aaKnown RBP6.09□□□□□ -1.44
EPHA4-201ENST00000281821 A0A1B0GV90 55 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 ZNF207O43670 478 aaKnown RBP6.08□□□□□ -1.44
EPHA4-201ENST00000281821 IGHV3-48P01763 117 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 CRYBB3P26998 211 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 OSTCQ9NRP0 149 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 TCRAP04437 139 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 TPSG1Q9NRR2 321 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 PROP1O75360 226 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 PAX9P55771 341 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 CEP350Q5VT06 3117 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 FAM231BA6NCW3 169 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 PPBPP02775 128 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 CTSGP08311 255 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 C19orf35Q6ZS72 473 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 LINC01006Q8NI28 216 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 SPXQ9BT56 116 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 S4R3C0 116 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 TMEM97Q5BJF2 176 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 PAM16Q9Y3D7 125 aa6.08□□□□□ -1.44
EPHA4-201ENST00000281821 TRBV19A0A075B6N1 114 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 IGHV3OR16-13A0A075B7E8 117 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 IGHV3-74A0A0B4J1X5 117 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 PCP4P48539 62 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 BCL6BQ8N143 479 aaPredicted RBP6.07□□□□□ -1.44
EPHA4-201ENST00000281821 TRGC2P03986 189 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 COL5A1-AS1Q5SY13 56 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 GSN-AS1Q9NRJ2 163 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 HELZ2Q9BYK8 2649 aaKnown RBP6.07□□□□□ -1.44
EPHA4-201ENST00000281821 FAM90A2PQ658T7 463 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 NHLRC2Q8NBF2 726 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 HSPB9Q9BQS6 159 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 PMS2P5A8MQ11 134 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 FSHBP01225 129 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 IGKV1-17P01599 117 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 SGK494Q96LW2 274 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 HTTP42858 3142 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 A8MWP6 167 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 ZNF688P0C7X2 276 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 RPP25LQ8N5L8 163 aaKnown RBP6.07□□□□□ -1.44
EPHA4-201ENST00000281821 ZNF702PQ9H963 129 aa6.07□□□□□ -1.44
EPHA4-201ENST00000281821 MDKP21741 143 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-201ENST00000281821 FAM3BP58499 235 aaPredicted RBP6.06□□□□□ -1.44
EPHA4-201ENST00000281821 GSX1Q9H4S2 264 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms