RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 EEF1AKMT3Q96AZ1 226 aa16.21■□□□□ 0.19
YBX3-202ENST00000279550 NOL4LQ96MY1 436 aaPredicted RBP16.21■□□□□ 0.19
YBX3-202ENST00000279550 ZFAND3Q9H8U3 227 aa16.21■□□□□ 0.19
YBX3-202ENST00000279550 IGF1P05019 195 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 PRB4P10163 310 aaPredicted RBP16.2■□□□□ 0.18
YBX3-202ENST00000279550 SRD5A1P18405 259 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 RPL15P61313 204 aaKnown RBP16.2■□□□□ 0.18
YBX3-202ENST00000279550 RPEL1Q2QD12 228 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 ACTL10Q5JWF8 245 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 TMEM86BQ8N661 226 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 RABAC1Q9UI14 185 aa16.2■□□□□ 0.18
YBX3-202ENST00000279550 ATP5G2Q06055 141 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 IBA57Q5T440 356 aaKnown RBP16.19■□□□□ 0.18
YBX3-202ENST00000279550 Q71RC1 249 aaPredicted RBP16.19■□□□□ 0.18
YBX3-202ENST00000279550 GNB4Q9HAV0 340 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 HOXA5P20719 270 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 S100A7AQ86SG5 101 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 FMC1Q96HJ9 113 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 RNF24Q9Y225 148 aa16.19■□□□□ 0.18
YBX3-202ENST00000279550 TRAV8-1A0A0A6YYK1 113 aa16.18■□□□□ 0.18
YBX3-202ENST00000279550 TRGV3P03979 118 aa16.18■□□□□ 0.18
YBX3-202ENST00000279550 GOLT1AQ6ZVE7 132 aa16.18■□□□□ 0.18
YBX3-202ENST00000279550 LINC00518Q8N0U6 118 aa16.18■□□□□ 0.18
YBX3-202ENST00000279550 SMAD5-AS1Q9Y6J3 95 aa16.18■□□□□ 0.18
YBX3-202ENST00000279550 TRBV7-1A0A0A6YYK4 115 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 LTAP01374 205 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 IGLV2-11P01706 119 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 FRMD6-AS1P0C7T7 363 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 OR8I2Q8N0Y5 310 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 GPR82Q96P67 336 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 MLST8Q9BVC4 326 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 SERTAD4Q9NUC0 356 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 HIVEP2P31629 2446 aa16.17■□□□□ 0.18
YBX3-202ENST00000279550 TRAV9-1A0A075B6T8 112 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 CLPSL1A2RUU4 121 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 DNAJC9-AS1A6NH13 148 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 FAM223BA6NKX1 122 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 IFITM10A6NMD0 228 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 CYSRT1A8MQ03 144 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 BMPR1BO00238 502 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 S100A9P06702 114 aaKnown RBP16.16■□□□□ 0.18
YBX3-202ENST00000279550 PPIFP30405 207 aaKnown RBP16.16■□□□□ 0.18
YBX3-202ENST00000279550 TCL1AP56279 114 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 GFI1BQ5VTD9 330 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 PRR27Q6MZM9 219 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 FAM231DQ6ZW35 169 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 Q86TA4 180 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 FAM223AQ8IWN6 122 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 NUDT10Q8NFP7 164 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 CMTM2Q8TAZ6 248 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 NUDT11Q96G61 164 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 CUBNO60494 3623 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 CA1P00915 261 aaPredicted RBP16.16■□□□□ 0.18
YBX3-202ENST00000279550 LYPD1Q8N2G4 141 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 BTF3L4Q96K17 158 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 NPFFR1Q9GZQ6 430 aa16.16■□□□□ 0.18
YBX3-202ENST00000279550 GAR1Q9NY12 217 aaKnown RBP16.16■□□□□ 0.18
YBX3-202ENST00000279550 HIVEP1P15822 2718 aa16.15■□□□□ 0.18
YBX3-202ENST00000279550 ZNF705GA8MUZ8 300 aaPredicted RBP16.15■□□□□ 0.18
YBX3-202ENST00000279550 INAFM1C9JVW0 142 aa16.15■□□□□ 0.18
YBX3-202ENST00000279550 M0R3E3 92 aa16.15■□□□□ 0.18
YBX3-202ENST00000279550 LINC00322Q6ZN03 302 aaPredicted RBP16.15■□□□□ 0.18
YBX3-202ENST00000279550 ESM1Q9NQ30 184 aa16.15■□□□□ 0.18
YBX3-202ENST00000279550 GATCO43716 136 aaKnown RBP16.14■□□□□ 0.17
YBX3-202ENST00000279550 RPL7P18124 248 aaKnown RBP16.14■□□□□ 0.17
YBX3-202ENST00000279550 TPPP2P59282 170 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 SMIM27A0A1W2PRY6 76 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 PDE6HQ13956 83 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 SMIM12Q96EX1 92 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 ASCL2Q99929 193 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 PRSS22Q9GZN4 317 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 KLK15Q9H2R5 256 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 TRAPPC1Q9Y5R8 145 aa16.14■□□□□ 0.17
YBX3-202ENST00000279550 PRNTQ86SH4 94 aa16.13■□□□□ 0.17
YBX3-202ENST00000279550 SETXQ7Z333 2677 aaKnown RBP16.12■□□□□ 0.17
YBX3-202ENST00000279550 TRBV6-1A0A0K0K1D8 114 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 ZNF207O43670 478 aaKnown RBP16.12■□□□□ 0.17
YBX3-202ENST00000279550 SPINK4O60575 86 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 TRBV12-3P01733 135 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 APOHP02749 345 aaPredicted RBP16.12■□□□□ 0.17
YBX3-202ENST00000279550 CBLN1P23435 193 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 CDX1P47902 265 aaPredicted RBP16.12■□□□□ 0.17
YBX3-202ENST00000279550 TMEM95Q3KNT9 176 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 LCNL1Q6ZST4 164 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 ZNF418Q8TF45 676 aaPredicted RBP16.12■□□□□ 0.17
YBX3-202ENST00000279550 ZNF702PQ9H963 129 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 ZNF580Q9UK33 172 aa16.12■□□□□ 0.17
YBX3-202ENST00000279550 IGHV3-66A0A0C4DH42 116 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 DIRC3C9JPN6 131 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 BRI3O95415 125 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 SLC35B1P78383 322 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 HIST3H2BBQ8N257 126 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 TMEM190Q8WZ59 177 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 GRAMD2BQ96HH9 432 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 ZNF785A8K8V0 405 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 H3BUA1 57 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 CFHR3Q02985 330 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 ATP6V0BQ99437 205 aa16.11■□□□□ 0.17
YBX3-202ENST00000279550 ZNF492Q9P255 531 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms