RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 LGALS9BQ3B8N2 356 aa7.16□□□□□ -1.26
CTDSPL-201ENST00000273179 PLXNA4Q9HCM2 1894 aa7.16□□□□□ -1.26
CTDSPL-201ENST00000273179 MED12LQ86YW9 2145 aa7.16□□□□□ -1.26
CTDSPL-201ENST00000273179 IGHV1-24A0A0C4DH33 117 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 SLC25A30Q5SVS4 291 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 STPG1Q5TH74 334 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 SHANK2-AS3Q9BTD1 123 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 TMEM133Q9H2Q1 129 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 CKS2P33552 79 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 DYNLRB1Q9NP97 96 aa7.15□□□□□ -1.26
CTDSPL-201ENST00000273179 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 CTXND1A0A1B0GTU2 59 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 IGHV4-39P01824 125 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 HBBP68871 147 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 SPEM2Q0P670 501 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 LGALS9CQ6DKI2 356 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 SEM1Q6ZVN7 128 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 IMUPQ9GZP8 106 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 C15orf61A6NNL5 157 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 LINC01545Q5VT33 79 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 MYOZ3Q8TDC0 251 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 VKORC1Q9BQB6 163 aa7.15□□□□□ -1.27
CTDSPL-201ENST00000273179 BRWD1Q9NSI6 2320 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 SFTPA2Q8IWL1 248 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 SPAG17Q6Q759 2223 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 NSUN5P1Q3KNT7 163 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 H1FXQ92522 213 aaKnown RBP7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 FAM19A4Q96LR4 140 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 DOCK11Q5JSL3 2073 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 CRYGAP11844 174 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 OR10AC1Q8NH08 325 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 OR52N5Q8NH56 324 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 CELSR3Q9NYQ7 3312 aa7.14□□□□□ -1.27
CTDSPL-201ENST00000273179 SERF2P84101 59 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 LINC01555Q8NAE3 123 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 Q9H3A6 140 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 LINC01549A6NIU2 74 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 HIST1H4AP62805 103 aaKnown RBP7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 ASPHD1Q5U4P2 390 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF793Q6ZN11 406 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 Q6ZS92 163 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 TANC1Q9C0D5 1861 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF672Q499Z4 452 aaPredicted RBP7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 C1orf140Q5VVS0 124 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 TAF15Q92804 592 aaKnown RBP eCLIP7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 MED13Q9UHV7 2174 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 PGLYRP1O75594 196 aaPredicted RBP7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 Q8N976 141 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
CTDSPL-201ENST00000273179 NPYP01303 97 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 HIGD1BQ9P298 99 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 BEAN1Q3B7T3 259 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 CFAP126Q5VTH2 177 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 TMEM252Q8N6L7 170 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 GVQW1Q8N7I0 195 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 ZPLD1Q8TCW7 415 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 DEFB126Q9BYW3 111 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
CTDSPL-201ENST00000273179 IGHV1OR15-9A0A0B4J2B8 117 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 K7EMT4 169 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 IGHG2P01859 326 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 ATXN8Q156A1 80 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 PTPRSQ13332 1948 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 FXYD3Q14802 87 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 OBSL1O75147 1896 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 HEATR1Q9H583 2144 aaKnown RBP7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 ZIC3O60481 467 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 NCR2O95944 276 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 APOHP02749 345 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 ACYP1P07311 99 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 SLC25A48Q6ZT89 311 aaKnown RBP7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 DEFB119Q8N690 84 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 NPCDR1Q9BY65 106 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 NDUFS5O43920 106 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 RFLNBQ8N5W9 214 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 PRSS27Q9BQR3 290 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 HHLA3Q9XRX5 114 aa7.11□□□□□ -1.27
CTDSPL-201ENST00000273179 WDR86Q86TI4 376 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 PFN4Q8NHR9 129 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 MDC1Q14676 2089 aaKnown RBP7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 GBF1Q92538 1859 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 HILS1P60008 231 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 Q5XG85 94 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 NFE4Q86UQ8 179 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF106Q9H2Y7 1883 aaKnown RBP7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 FFAR1O14842 300 aa7.1□□□□□ -1.27
CTDSPL-201ENST00000273179 SRSF10O75494 262 aaKnown RBP7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 CLDN14O95500 239 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF137PP52743 207 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms