RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ZNF134P52741 427 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 FAM223AQ8IWN6 122 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
TIMP3-201ENST00000266085 IGHV1-69DA0A0B4J2H0 117 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 IGHV2-70DA0A0C4DH43 119 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 SHISA9B4DS77 424 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 IGHV1-69P01742 117 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 HTN3P15516 51 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 SRRM4A7MD48 611 aaKnown RBP12.42□□□□□ -0.42
TIMP3-201ENST00000266085 WISP2O76076 250 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 LCN12Q6JVE5 192 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 KAAG1Q9UBP8 84 aa12.42□□□□□ -0.42
TIMP3-201ENST00000266085 SNAI2O43623 268 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 ARL6IP6Q8N6S5 226 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 Q8TAT8 98 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 C11orf53Q8IXP5 236 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.42
TIMP3-201ENST00000266085 Q96MF0 132 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 BEX4Q9NWD9 120 aaPredicted RBP12.41□□□□□ -0.42
TIMP3-201ENST00000266085 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
TIMP3-201ENST00000266085 ZMAT5Q9UDW3 170 aaKnown RBP12.41□□□□□ -0.42
TIMP3-201ENST00000266085 LOC102724200A0A096LPH7 203 aaPredicted RBP12.4□□□□□ -0.42
TIMP3-201ENST00000266085 SAP30O75446 220 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
TIMP3-201ENST00000266085 FAM90A2PQ658T7 463 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 SHANK2-AS3Q9BTD1 123 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 LOC105371267A0A1B0GV96 52 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 OVOL3O00110 214 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
TIMP3-201ENST00000266085 LINC00477Q96M19 166 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 COL4A3Q01955 1670 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 VCX2Q9H322 139 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
TIMP3-201ENST00000266085 PEF1Q9UBV8 284 aaKnown RBP12.4□□□□□ -0.42
TIMP3-201ENST00000266085 OBSL1O75147 1896 aa12.4□□□□□ -0.42
TIMP3-201ENST00000266085 G3V318 75 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 PSG3Q16557 428 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 LCNL1Q6ZST4 164 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 FCN3O75636 299 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
TIMP3-201ENST00000266085 PDE6HQ13956 83 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 NIT1Q86X76 327 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 FGF23Q9GZV9 251 aaPredicted RBP12.39□□□□□ -0.43
TIMP3-201ENST00000266085 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 H3BRM9 83 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 FAM110DQ8TAY7 271 aaPredicted RBP12.39□□□□□ -0.43
TIMP3-201ENST00000266085 HIST1H2BLQ99880 126 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 C22orf46C9J442 243 aa12.39□□□□□ -0.43
TIMP3-201ENST00000266085 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
TIMP3-201ENST00000266085 UBE2CO00762 179 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 EVI2AP22794 236 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 MST1LQ2TV78 715 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 CR1LQ2VPA4 569 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 RASL11AQ6T310 242 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 LYZL1Q6UWQ5 148 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 GTSCR1Q86UQ5 136 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 PRB1P04280 392 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 CHCHD1Q96BP2 118 aaKnown RBP12.38□□□□□ -0.43
TIMP3-201ENST00000266085 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 YPEL3P61236 119 aaPredicted RBP12.38□□□□□ -0.43
TIMP3-201ENST00000266085 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 NDUFA3O95167 84 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 NDUFB8O95169 186 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 SMIM12Q96EX1 92 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
TIMP3-201ENST00000266085 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
TIMP3-201ENST00000266085 TNCP24821 2201 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 WT1-ASQ06250 92 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 TOMM7Q9P0U1 55 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 TPSG1Q9NRR2 321 aa12.37□□□□□ -0.43
TIMP3-201ENST00000266085 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 ADCYAP1P18509 176 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 SPRNQ5BIV9 151 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 NUP35Q8NFH5 326 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 DYSFO75923 2080 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 SMIM13P0DJ93 91 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 SYNJ2BPP57105 145 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 PLP1P60201 277 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 C9JQL5 133 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 SH2D1AO60880 128 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 HIST3H2BBQ8N257 126 aa12.36□□□□□ -0.43
TIMP3-201ENST00000266085 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
TIMP3-201ENST00000266085 NCR2O95944 276 aa12.35□□□□□ -0.43
TIMP3-201ENST00000266085 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
TIMP3-201ENST00000266085 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
TIMP3-201ENST00000266085 D6R8Y8 96 aa12.35□□□□□ -0.43
TIMP3-201ENST00000266085 ACTL10Q5JWF8 245 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms