RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PPIAL4GP0DN37 164 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 A0A1B0GV72 72 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 TMEM213A2RRL7 107 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 VSTM5A8MXK1 200 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 LPAL2Q16609 132 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 CD300EQ496F6 205 aaPredicted RBP9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 ZNF474Q6S9Z5 364 aaPredicted RBP9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 IGFL2Q6UWQ7 119 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 NUP37Q8NFH4 326 aa9.79□□□□□ -0.84
CHMP2B-201ENST00000263780 I3L2K1 104 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 NKX2-8O15522 239 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 GNG7O60262 68 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 CEACAM4O75871 244 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 BMI1P35226 326 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 C1orf185Q5T7R7 199 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 PRSS57Q6UWY2 283 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 COX8CQ7Z4L0 72 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 RITA1Q96K30 269 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 SH2D1AO60880 128 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 ATP5LO75964 103 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 AZU1P20160 251 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 CCL8P80075 99 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 TM2D2Q9BX73 214 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 DKK2Q9UBU2 259 aa9.78□□□□□ -0.84
CHMP2B-201ENST00000263780 TEX22C9J3V5 150 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 EVI2AP22794 236 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 FCER1GP30273 86 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 TWIST1Q15672 202 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 TAL2Q16559 108 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 FDCSPQ8NFU4 85 aa9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 RAI1Q7Z5J4 1906 aaPredicted RBP9.77□□□□□ -0.84
CHMP2B-201ENST00000263780 NPYP01303 97 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 IGKV1-17P01599 117 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 IGKCP01834 107 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 CD40P25942 277 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 FCGR2BP31994 310 aaPredicted RBP9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 TCTAP57738 103 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 SEM1Q6ZVN7 128 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 ARRDC1-AS1Q9H2J1 176 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.85
CHMP2B-201ENST00000263780 IGHV3-72A0A0B4J1Y9 119 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 PRSS1P07477 247 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 IGHV1-8P0DP01 117 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 FXYD2P54710 66 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 SRSF2Q01130 221 aaKnown RBP9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 FOXI2Q6ZQN5 318 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 CEND1Q8N111 149 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 C17orf77Q96MU5 243 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 C8orf49Q96NF6 230 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 RNF5Q99942 180 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 SELENOKQ9Y6D0 94 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 URB1O60287 2271 aaKnown RBP9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 TMEM178BH3BS89 294 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 APELAP0DMC3 54 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 DLX6P56179 175 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 ODF1Q14990 250 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 Q71RC1 249 aaPredicted RBP9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 RNF125Q96EQ8 232 aa9.76□□□□□ -0.85
CHMP2B-201ENST00000263780 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 GAGE12HA6NDE8 117 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 E9PLD3 99 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 DPM2O94777 84 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 CD59P13987 128 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 WT1P19544 449 aaPredicted RBP9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 RAB1BQ9H0U4 201 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 LEPP41159 167 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 FXYD7P58549 80 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 TM4SF20Q53R12 229 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 PHLDA1Q8WV24 401 aaPredicted RBP9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
CHMP2B-201ENST00000263780 KLF17Q5JT82 389 aaPredicted RBP9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 TMEM108Q6UXF1 575 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 NHP2Q9NX24 153 aaKnown RBP9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 KNTC1P50748 2209 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 FRYQ5TBA9 3013 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 TRBV25-1A0A075B6N4 114 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 A0A1W2PRD5 423 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 A0A1W2PRF3 423 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 A0A1W2PRM7 423 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 TNFRSF13BO14836 293 aaPredicted RBP9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 IL4P05112 153 aa9.74□□□□□ -0.85
CHMP2B-201ENST00000263780 LOXP28300 417 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms