RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 K7EP34 96 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 ANAPC13Q9BS18 74 aa13.12□□□□□ -0.31
SREBF1-201ENST00000261646 C15orf65H3BRN8 121 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 EMP1P54849 157 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 FAM74A4Q5TZK3 123 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 IGLV2-14P01704 120 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 TMPRSS3P57727 454 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 CSTL1Q9H114 145 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 TMEM133Q9H2Q1 129 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 MED12LQ86YW9 2145 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 KLF17Q5JT82 389 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-201ENST00000261646 GFRA4Q9GZZ7 299 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
SREBF1-201ENST00000261646 PVRIGQ6DKI7 326 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 ZNF815PA8K554 130 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 TEX29Q8N6K0 151 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 CT83Q5H943 113 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 KHDC1LQ5JSQ8 128 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 A0A1W2PPI3 338 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 TAX1BP3O14907 124 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 TMEM158Q8WZ71 300 aa13.1□□□□□ -0.31
SREBF1-201ENST00000261646 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
SREBF1-201ENST00000261646 DPM3Q9P2X0 92 aa13.09□□□□□ -0.31
SREBF1-201ENST00000261646 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
SREBF1-201ENST00000261646 SRSF1Q07955 248 aaKnown RBP eCLIP13.09□□□□□ -0.312e-7■■■■■ 30.5
SREBF1-201ENST00000261646 NCOR1P1Q9H4R4 102 aa13.09□□□□□ -0.31
SREBF1-201ENST00000261646 A0A1W2PPM0 123 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 SH2D1AO60880 128 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 CD59P13987 128 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 TMEM200BQ69YZ2 307 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 SRRM4A7MD48 611 aaKnown RBP13.08□□□□□ -0.32
SREBF1-201ENST00000261646 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-201ENST00000261646 CD300EQ496F6 205 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-201ENST00000261646 IGFL4Q6B9Z1 124 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 DUX4L9Q6RFH8 374 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-201ENST00000261646 RAB9AP51151 201 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 NDUFA4L2Q9NRX3 87 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 EML6Q6ZMW3 1958 aa13.08□□□□□ -0.32
SREBF1-201ENST00000261646 WT1-ASQ06250 92 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-201ENST00000261646 TP53TG3Q9ULZ0 132 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 DKK1O94907 266 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 ZNF747Q9BV97 191 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 A8MWV9 139 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 IGKV3-15P01624 115 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 AZU1P20160 251 aa13.07□□□□□ -0.32
SREBF1-201ENST00000261646 NDUFB8O95169 186 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 MORN5Q5VZ52 161 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 CHTOPQ9Y3Y2 248 aaKnown RBP13.06□□□□□ -0.32
SREBF1-201ENST00000261646 TRAV40A0A0B4J280 105 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 BSPH1Q075Z2 132 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 RHOGP84095 191 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 TP73-AS1Q9UF72 201 aa13.06□□□□□ -0.32
SREBF1-201ENST00000261646 ADAMTS9Q9P2N4 1935 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 K7ERJ3 54 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 SIGLEC8Q9NYZ4 499 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 SSBP2P81877 361 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-201ENST00000261646 KRTAP27-1Q3LI81 207 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 TECTAO75443 2155 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 LYNX1G3V0Z9 82 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 LYNX1P0DP58 116 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 C17orf58Q2M2W7 97 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 ARPC1AQ92747 370 aa13.05□□□□□ -0.32
SREBF1-201ENST00000261646 RBX1P62877 108 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 LAGE3Q14657 143 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 PCP2Q8IVA1 136 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 MUC6Q6W4X9 2439 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 GAGE12HA6NDE8 117 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 HAX1O00165 279 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 TIMM23O14925 209 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 NBR2O15453 112 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 ANKRD39Q53RE8 183 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 H3BMG7 143 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 PRTN3P24158 256 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 CLEC2AQ6UVW9 174 aa13.04□□□□□ -0.32
SREBF1-201ENST00000261646 UBTD1Q9HAC8 227 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 CACNA1AO00555 2505 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 TMEM8BA6NDV4 472 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 ASIPP42127 132 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 VCX2Q9H322 139 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 DLX4Q92988 240 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-201ENST00000261646 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
SREBF1-201ENST00000261646 ZNF56Q15929 161 aa13.02□□□□□ -0.32
SREBF1-201ENST00000261646 MDS2Q8NDY4 140 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms