RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CSPG4Q6UVK1 2322 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 D6R8Y8 96 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 SMKR1H3BMG3 65 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 S100A4P26447 101 aaKnown RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 CACNG7P62955 275 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 IGFL2Q6UWQ7 119 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 AMN1Q8IY45 258 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 NCOR1P1Q9H4R4 102 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 C21orf62Q9NYP8 219 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 SOX21Q9Y651 276 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 TMEM213A2RRL7 107 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 BUB1B-PAK6H3BSN5 160 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 NBR2O15453 112 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 ESDP10768 282 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 CEACAM8P31997 349 aaPredicted RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 GPR183P32249 361 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 RPL24P83731 157 aaKnown RBP3.79□□□□□ -1.8
USP44-201ENST00000258499 AMMECR1LQ6DCA0 310 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 LYZL1Q6UWQ5 148 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 PRSS33Q8NF86 280 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 GTSF1Q8WW33 167 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 COX11Q9Y6N1 276 aa3.79□□□□□ -1.8
USP44-201ENST00000258499 DOPEY2Q9Y3R5 2298 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 IGKV1D-37A0A075B6S9 117 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 LOC105371242A0A075B767 164 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 A0A1B0GWJ7 208 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 IGLC1P0CG04 106 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 RPL7P18124 248 aaKnown RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 GCSHP23434 173 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 IFI27P40305 119 aaPredicted RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 ZNF414Q96IQ9 312 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 KLK15Q9H2R5 256 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ST20Q9HBF5 79 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 PCSK5Q92824 1860 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ACACBO00763 2458 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 IGHV3OR16-10A0A075B7F0 116 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 C7orf71A4D174 169 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 EVI2AP22794 236 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 UBE2V1Q13404 147 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ZNF672Q499Z4 452 aaPredicted RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 ORMDL3Q8N138 153 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 C8orf49Q96NF6 230 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 MRPS16Q9Y3D3 137 aaKnown RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 TET2Q6N021 2002 aaPredicted RBP3.78□□□□□ -1.8
USP44-201ENST00000258499 CCL25O15444 150 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 RUSC1-AS1Q66K80 236 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 THAP8Q8NA92 274 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ARPC1AQ92747 370 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ZC2HC1AQ96GY0 325 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 RABAC1Q9UI14 185 aa3.78□□□□□ -1.8
USP44-201ENST00000258499 ASPMQ8IZT6 3477 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 A6NDN8 102 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 IGLV2-23P01705 113 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 THBDP07204 575 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 BMI1P35226 326 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 COTL1Q14019 142 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 SPANXN1Q5VSR9 72 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 PET117Q6UWS5 81 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 MRPL52Q86TS9 123 aaKnown RBP3.77□□□□□ -1.81
USP44-201ENST00000258499 FER1L6-AS1Q8NA97 138 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 ORAOV1Q8WV07 137 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 FAM208BQ5VWN6 2430 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 ADGRG4Q8IZF6 3080 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 H3BUT2 72 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 GP9P14770 177 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 GAGE1Q13065 139 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 CCDC144NLQ6NUI1 221 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 LINC00527Q9UJ94 153 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 DMDP11532 3685 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 TRBV19A0A075B6N1 114 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 TRAV8-6A0A0B4J262 113 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 A1L4Q6 167 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 VWC2LB2RUY7 222 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 K7ERU9 68 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 LTAP01374 205 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 IGKV1-17P01599 117 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 PAX1P15863 534 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 GRNP28799 593 aaKnown RBP3.77□□□□□ -1.81
USP44-201ENST00000258499 PSG3Q16557 428 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 PVRIGQ6DKI7 326 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 TMEM75Q8N9X5 138 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 WIPF2Q8TF74 440 aaPredicted RBP3.77□□□□□ -1.81
USP44-201ENST00000258499 SHANK2-AS3Q9BTD1 123 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 UBTD1Q9HAC8 227 aa3.77□□□□□ -1.81
USP44-201ENST00000258499 CHD8Q9HCK8 2581 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 TRAV30A0A087WSZ9 112 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 C2orf70A6NJV1 201 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 SH2D1AO60880 128 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 GOSR1O95249 250 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 IGFL3Q6UXB1 125 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 LINC00311Q8N616 119 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 TMEM160Q9NX00 188 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 PPP1R14DQ9NXH3 145 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms