RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 DNAJC9-AS1A6NH13 148 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 OOSP1A8MZH6 123 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 MAS1LP35410 378 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 SELENOTP62341 195 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 OR5R1Q8NH85 324 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 Q9H3A6 140 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 TGOLN2O43493 480 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 ERCC8Q13216 396 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 OCC1Q8TAD7 63 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 ESM1Q9NQ30 184 aa9.04□□□□□ -0.96
LIN28A-201ENST00000254231 TSTD3H0UI37 97 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
LIN28A-201ENST00000254231 OR11H1Q8NG94 326 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 CCDC140Q96MF4 163 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 A0A1B0GV90 55 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 A6NDX4 124 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 ZNF124Q15973 351 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 KRTAP1-3Q8IUG1 177 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 ZNF503Q96F45 646 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 METTL26Q96S19 204 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 CLDN34H7C241 214 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 BMPR1BO00238 502 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 TMEM116Q8NCL8 245 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 ZNF418Q8TF45 676 aaPredicted RBP9.03□□□□□ -0.96
LIN28A-201ENST00000254231 RNF5Q99942 180 aa9.03□□□□□ -0.96
LIN28A-201ENST00000254231 GRIFINA4D1Z8 144 aa9.02□□□□□ -0.97
LIN28A-201ENST00000254231 TRGC1P0CF51 173 aa9.02□□□□□ -0.97
LIN28A-201ENST00000254231 FAM110DQ8TAY7 271 aaPredicted RBP9.02□□□□□ -0.97
LIN28A-201ENST00000254231 AAMDCQ9H7C9 122 aa9.02□□□□□ -0.97
LIN28A-201ENST00000254231 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
LIN28A-201ENST00000254231 PRM2P04554 102 aa9.02□□□□□ -0.97
LIN28A-201ENST00000254231 DAZAP1Q96EP5 407 aaKnown RBP9.02□□□□□ -0.97
LIN28A-201ENST00000254231 GATA3P23771 443 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 CNN1P51911 297 aaKnown RBP9.01□□□□□ -0.97
LIN28A-201ENST00000254231 RIPPLY3P57055 190 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 ZNF506Q5JVG8 444 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 COMMD1Q8N668 190 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 Q8N6K4 173 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 MBD3L1Q8WWY6 194 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 ZNF586Q9NXT0 402 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
LIN28A-201ENST00000254231 TRBV20OR9-2A0A075B6H5 130 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
LIN28A-201ENST00000254231 PYY3Q5JQD4 70 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 FAM90A2PQ658T7 463 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 TTC9CQ8N5M4 171 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
LIN28A-201ENST00000254231 ELOA3CA0A087WX78 387 aaPredicted RBP9□□□□□ -0.97
LIN28A-201ENST00000254231 H0Y8G0 127 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 ZNF738Q8NE65 137 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 A0A096LNT2 108 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 XKRY2A2RUG3 117 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 NPIPB5A8MRT5 1133 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 PMS2P11Q13670 270 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 TEX38Q6PEX7 206 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 RNF2Q99496 336 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 FSTL3O95633 263 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 RPL23P62829 140 aaKnown RBP9□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
LIN28A-201ENST00000254231 LINC00477Q96M19 166 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
LIN28A-201ENST00000254231 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
LIN28A-201ENST00000254231 FRMD6-AS1P0C7T7 363 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 CSN1S1P47710 185 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 EMP1P54849 157 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 VWC2Q2TAL6 325 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 ZNF705AQ6ZN79 300 aaPredicted RBP8.99□□□□□ -0.97
LIN28A-201ENST00000254231 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 TRGV9Q99603 122 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 MEGF9Q9H1U4 602 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 MANBALQ9NQG1 85 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 IGHV4OR15-8A0A075B7B6 117 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 A0A087WW49 117 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 ORM1P02763 201 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 CD28P10747 220 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 Q6ZQT7 251 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 LINC00469Q8N7U9 141 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 DYNLRB2Q8TF09 96 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BJP06899 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BOP23527 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BBP33778 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 GALR1P47211 349 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BDP58876 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BCP62807 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST2H2BEQ16778 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BHQ93079 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 FAM167A-AS1Q96KT0 104 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BNQ99877 126 aa8.99□□□□□ -0.97
LIN28A-201ENST00000254231 HIST1H2BMQ99879 126 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms