RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 WIPF3A6NGB9 483 aa9.16□□□□□ -0.94
USP31-201ENST00000219689 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
USP31-201ENST00000219689 RNF115Q9Y4L5 304 aa9.16□□□□□ -0.94
USP31-201ENST00000219689 PLA2G2FQ9BZM2 168 aa9.16□□□□□ -0.94
USP31-201ENST00000219689 A0A1W2PR77 199 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 FOXS1O43638 330 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 RHOGP84095 191 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 ASPHD1Q5U4P2 390 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 KLK10O43240 276 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 CT55Q8WUE5 264 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 TMEM54Q969K7 222 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 VGLL1Q99990 258 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 COL9A1P20849 921 aa9.15□□□□□ -0.94
USP31-201ENST00000219689 LYZL4Q96KX0 146 aa9.15□□□□□ -0.95
USP31-201ENST00000219689 PNRC2Q9NPJ4 139 aaKnown RBP9.15□□□□□ -0.95
USP31-201ENST00000219689 ZNF501Q96CX3 271 aaPredicted RBP9.15□□□□□ -0.95
USP31-201ENST00000219689 ZNF497Q6ZNH5 498 aa9.15□□□□□ -0.95
USP31-201ENST00000219689 CYYR1Q96J86 154 aa9.15□□□□□ -0.95
USP31-201ENST00000219689 IGHG4P01861 327 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 CLUHP3Q96NS8 147 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 LINC00479Q96M42 142 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
USP31-201ENST00000219689 KLF14Q8TD94 323 aaPredicted RBP9.14□□□□□ -0.95
USP31-201ENST00000219689 BRK1Q8WUW1 75 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 ADAMTS20P59510 1910 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 WFDC2Q14508 124 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 SH2D1AO60880 128 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 RNF183Q96D59 192 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 BPTFQ12830 3046 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
USP31-201ENST00000219689 C12orf74Q32Q52 190 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 NMSQ5H8A3 153 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 DUSP15Q9H1R2 295 aaPredicted RBP9.13□□□□□ -0.95
USP31-201ENST00000219689 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 SAA2-SAA4A0A096LPE2 208 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 SAA2P0DJI9 122 aaPredicted RBP9.13□□□□□ -0.95
USP31-201ENST00000219689 ZNF329Q86UD4 541 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 DEFB125Q8N687 156 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 HOXD3P31249 432 aaPredicted RBP9.13□□□□□ -0.95
USP31-201ENST00000219689 CHD8Q9HCK8 2581 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
USP31-201ENST00000219689 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
USP31-201ENST00000219689 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 TMEM30BQ3MIR4 351 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 C16orf97H3BN30 126 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 SLC25A39Q9BZJ4 359 aaPredicted RBP9.12□□□□□ -0.95
USP31-201ENST00000219689 TRAV41A0A0B4J266 112 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 TMEM243Q9BU79 118 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 FAM236AA0A1B0GUQ0 79 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 FAM236BA0A1B0GV22 79 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 IGLC1P0CG04 106 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 CT83Q5H943 113 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 WDR90Q96KV7 1748 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 SLC25A16P16260 332 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 C8orf86Q6ZUL3 223 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 CTSBP07858 339 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 FGFBP3Q8TAT2 258 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 OSR1Q8TAX0 266 aaPredicted RBP9.12□□□□□ -0.95
USP31-201ENST00000219689 SVIPQ8NHG7 77 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 PILRAQ9UKJ1 303 aa9.12□□□□□ -0.95
USP31-201ENST00000219689 IGKV1-9A0A0C4DH69 117 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 SOCS3O14543 225 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 RBMY1FQ15415 496 aaKnown RBP9.11□□□□□ -0.95
USP31-201ENST00000219689 THSD7AQ9UPZ6 1657 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 TIAF1O95411 115 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 STPG1Q5TH74 334 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 TFF1P04155 84 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 NTF4P34130 210 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 UTF1Q5T230 341 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 TTTY12Q9BZ98 90 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 LIME1Q9H400 295 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 TRGV2A0A075B6R0 118 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 OR11H6Q8NGC7 330 aa9.11□□□□□ -0.95
USP31-201ENST00000219689 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 FAM214BQ7L5A3 538 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 PRO1854Q9UHT4 67 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 RPUSD1Q9UJJ7 312 aaKnown RBP9.1□□□□□ -0.95
USP31-201ENST00000219689 CPAMD8Q8IZJ3 1885 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 PMS2P5A8MQ11 134 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 COL4A1P02462 1669 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 SPXQ9BT56 116 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 ZNF576Q9H609 170 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 K7EMI3 77 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 UPK2O00526 184 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 LINC01587Q99440 93 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 IQCF6A8MYZ5 107 aa9.1□□□□□ -0.95
USP31-201ENST00000219689 TRGV3P03979 118 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms