RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LY6G6DO95868 133 aa11.05□□□□□ -0.64
SIX4-201ENST00000216513 ABCA1O95477 2261 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 K7ERU9 68 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 CGB7P0DN87 165 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 MRPL16Q9NX20 251 aaKnown RBP11.04□□□□□ -0.64
SIX4-201ENST00000216513 ETV2O00321 342 aaPredicted RBP11.04□□□□□ -0.64
SIX4-201ENST00000216513 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 RPL23P62829 140 aaKnown RBP11.04□□□□□ -0.64
SIX4-201ENST00000216513 SRSF2Q01130 221 aaKnown RBP11.04□□□□□ -0.64
SIX4-201ENST00000216513 DIAPH2-AS1Q14236 149 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 CTSZQ9UBR2 303 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 TSPAN13O95857 204 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 DDTP30046 118 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 PET117Q6UWS5 81 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 GP9P14770 177 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 C9orf139Q6ZV77 190 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 OR11H2Q8NH07 326 aa11.04□□□□□ -0.64
SIX4-201ENST00000216513 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
SIX4-201ENST00000216513 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
SIX4-201ENST00000216513 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
SIX4-201ENST00000216513 SERF1AO75920 110 aa11.03□□□□□ -0.64
SIX4-201ENST00000216513 BCL6BQ8N143 479 aaPredicted RBP11.03□□□□□ -0.64
SIX4-201ENST00000216513 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
SIX4-201ENST00000216513 JOSD1Q15040 202 aaPredicted RBP11.03□□□□□ -0.64
SIX4-201ENST00000216513 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
SIX4-201ENST00000216513 ZNF138P52744 262 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.64
SIX4-201ENST00000216513 PAX9P55771 341 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 C17orf58Q2M2W7 97 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 OCC1Q8TAD7 63 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 SEPSECSQ9HD40 501 aaKnown RBP11.02□□□□□ -0.64
SIX4-201ENST00000216513 IL36BQ9NZH7 164 aa11.02□□□□□ -0.64
SIX4-201ENST00000216513 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 MMP23AO75900 390 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 SLURP1P55000 103 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 SMKR1H3BMG3 65 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
SIX4-201ENST00000216513 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 ERCC8Q13216 396 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 TTC32Q5I0X7 151 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
SIX4-201ENST00000216513 ACACBO00763 2458 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 FGF16O43320 207 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 LINC00479Q96M42 142 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 FBLN5Q9UBX5 448 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 HIVEP2P31629 2446 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 DNAJC9-AS1A6NH13 148 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 GAGE7O76087 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 TMEM50AO95807 157 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 GAGE12FP0CL80 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 GAGE12GP0CL81 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 GAGE12IP0CL82 117 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 BLCAPP62952 87 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
SIX4-201ENST00000216513 HAPLN4Q86UW8 402 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
SIX4-201ENST00000216513 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
SIX4-201ENST00000216513 CDX1P47902 265 aaPredicted RBP11□□□□□ -0.65
SIX4-201ENST00000216513 A0A096LPF7 62 aa11□□□□□ -0.65
SIX4-201ENST00000216513 IGLV2-23P01705 113 aa11□□□□□ -0.65
SIX4-201ENST00000216513 CXCL1P09341 107 aa11□□□□□ -0.65
SIX4-201ENST00000216513 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
SIX4-201ENST00000216513 NRN1Q9NPD7 142 aa11□□□□□ -0.65
SIX4-201ENST00000216513 NCOR2Q9Y618 2525 aa11□□□□□ -0.65
SIX4-201ENST00000216513 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
SIX4-201ENST00000216513 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
SIX4-201ENST00000216513 EPDR1Q9UM22 224 aa11□□□□□ -0.65
SIX4-201ENST00000216513 CYYR1Q96J86 154 aa11□□□□□ -0.65
SIX4-201ENST00000216513 TOMM40O96008 361 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 TCRAP04437 139 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 RNF182Q8N6D2 247 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 UTRNP46939 3433 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 H3BRM9 83 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 LINC00614P0C842 121 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 MED13LQ71F56 2210 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 CD5LO43866 347 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 LINC00518Q8N0U6 118 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 TRGV9Q99603 122 aa10.99□□□□□ -0.65
SIX4-201ENST00000216513 TPSG1Q9NRR2 321 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 PIFOQ8TCI5 191 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 PHLDA1Q8WV24 401 aaPredicted RBP10.98□□□□□ -0.65
SIX4-201ENST00000216513 MGST2Q99735 147 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 KAAG1Q9UBP8 84 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 HOXA5P20719 270 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 ZNF833PQ6ZTB9 187 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 VOPP1Q96AW1 172 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 DKK1O94907 266 aa10.98□□□□□ -0.65
SIX4-201ENST00000216513 LOXL1Q08397 574 aaPredicted RBP10.98□□□□□ -0.65
SIX4-201ENST00000216513 IGKV1-5P01602 117 aa10.97□□□□□ -0.65
SIX4-201ENST00000216513 FNDC4Q9H6D8 234 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms