RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Prss30Q9QYZ9 310 aa8.04□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Lama2Q60675 3118 aaKnown RBP8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Myo9bQ9QY06 2114 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Igkv4-63A0A0G2JFU6 117 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm45800A0A1B0GT24 152 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Cldn34c4A2ANA3 212 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Lbhd2G3UW55 114 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Sssca1P56873 199 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Supt4h1aP63271 117 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Serf2P84102 59 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Rnf224Q3UIW8 156 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Tmem171Q4KL18 322 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Nhlrc3Q8CCH2 347 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Ptrh2Q8R2Y8 181 aaKnown RBP8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Wrap73Q9JM98 462 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Lhx2Q9Z0S2 406 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Anapc1P53995 1944 aaKnown RBP8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr284A0A0U1RP76 321 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 4931422A03RikA2BHN9 113 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Scgb1b3J3QJY4 93 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Cox7a2P48771 83 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Zfp936Q3ULA8 456 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Apobec4Q497M3 374 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Il31Q6EAL8 163 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Rnf144bQ8BKD6 301 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Bricd5Q8BV89 174 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Slc25a16Q8C0K5 332 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 RprmQ9JJ72 109 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm12355A2A4X6 163 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Slc25a53A2AF28 346 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr1328B1ARV2 313 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm21789J3QMZ1 123 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm21870J3QPN2 123 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm21883J3QPV3 123 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Zfp11P10751 647 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Rpl31P62900 125 aaKnown RBP8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Srsf3P84104 164 aaKnown RBP8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Nhlh2Q64221 135 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr917Q7TRC3 309 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Wipi1Q8R3E3 446 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Sfxn3Q91V61 321 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Zfpl1Q9DB43 310 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Btbd17Q9DB72 478 aa8.03□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Ctxnd1A0A1B0GST9 59 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm15440D3Z3P4 90 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 BsgP18572 389 aaKnown RBP8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Ccl11P48298 97 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gm11110Q3U4K9 109 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Vmn1r195Q5SVD6 316 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Gpank1Q61858 372 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Tas2r114Q7M722 309 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr275Q7TS18 319 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Aadacl4Q8BM81 407 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Cypt1Q8CH20 168 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Vmn1r235Q8R297 328 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr1259Q8VEZ1 309 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr1242Q8VGM6 306 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Olfr206Q8VGP9 306 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Nkg7Q99PA5 165 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 Cela3bQ9CQ52 269 aa8.02□□□□□ -1.12
Ldlr-202ENSMUST00000213114 OdamA1E960 273 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Gm765B2RVL9 189 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 PtcraP0C6B2 199 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Tctn2Q2MV57 700 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 EcscrQ3TZW0 214 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 ParlQ5XJY4 377 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr91Q7TRL3 312 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Ntf4Q80VU4 209 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Rab11fip5Q8R361 645 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Exosc2Q8VBV3 293 aaKnown RBP8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr1440Q8VFV4 315 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Ccdc198Q9CPZ1 294 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr894Q9EQB2 313 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Foxj2Q9ES18 565 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 TncQ80YX1 2110 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Mpig6bD7PDD4 242 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr1220F7BL62 311 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Mpv17P19258 176 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Siah2Q06986 325 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Cln5Q3UMW8 341 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Obox7Q4KL20 218 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Tnfsf15Q5UBV8 252 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr147Q60886 317 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 MyofQ69ZN7 2048 aaKnown RBP8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 NracQ8BNX7 165 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr530Q8VFE8 307 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr786Q8VFH8 312 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Olfr1457Q8VFK3 317 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Znrf1Q91V17 227 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Sfxn4Q925N1 313 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Atp23Q9CWQ3 201 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Fxyd4Q9D2W0 88 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Prr30Q9D9B7 401 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Barx1Q9ER42 254 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Sdf2l1Q9ESP1 221 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Ighv5-4A0A075B5P9 117 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Gm21244J3QK38 227 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Hhipl1Q14DK5 791 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Spem1Q5F289 310 aa8.02□□□□□ -1.13
Ldlr-202ENSMUST00000213114 Tcf15Q60756 195 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms